RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 USH1GQ495M9 461 aa18.49■□□□□ 0.55
ATG4D-205ENST00000586477 TRIM60Q495X7 471 aa18.49■□□□□ 0.55
ATG4D-205ENST00000586477 FBXO16Q8IX29 292 aaPredicted RBP18.49■□□□□ 0.55
ATG4D-205ENST00000586477 GNEQ9Y223 722 aaKnown RBP18.49■□□□□ 0.55
ATG4D-205ENST00000586477 ATP11BQ9Y2G3 1177 aa18.49■□□□□ 0.55
ATG4D-205ENST00000586477 MRPL11Q9Y3B7 192 aaKnown RBP18.49■□□□□ 0.55
ATG4D-205ENST00000586477 PPP1R11O60927 126 aaPredicted RBP18.48■□□□□ 0.55
ATG4D-205ENST00000586477 CALML3P27482 149 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 ACLYP53396 1101 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 KCNA10Q16322 511 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 C1orf53Q5VUE5 145 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 RNF207Q6ZRF8 634 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 EEPD1Q7L9B9 569 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 HEATR3Q7Z4Q2 680 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 SAMD3Q8N6K7 520 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 TSEN34Q9BSV6 310 aaKnown RBP18.48■□□□□ 0.55
ATG4D-205ENST00000586477 BARHL2Q9NY43 387 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 PCDHA1Q9Y5I3 950 aa18.48■□□□□ 0.55
ATG4D-205ENST00000586477 OPLAHO14841 1288 aa18.47■□□□□ 0.55
ATG4D-205ENST00000586477 SMPD1P17405 629 aa18.47■□□□□ 0.55
ATG4D-205ENST00000586477 EDNRBP24530 442 aa18.47■□□□□ 0.55
ATG4D-205ENST00000586477 GALNT17Q6IS24 598 aa18.47■□□□□ 0.55
ATG4D-205ENST00000586477 SH3RF1Q7Z6J0 888 aa18.47■□□□□ 0.55
ATG4D-205ENST00000586477 MCF2L2Q86YR7 1114 aa18.47■□□□□ 0.55
ATG4D-205ENST00000586477 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
ATG4D-205ENST00000586477 ALG1Q9BT22 464 aa18.47■□□□□ 0.55
ATG4D-205ENST00000586477 COL20A1Q9P218 1284 aa18.47■□□□□ 0.55
ATG4D-205ENST00000586477 SOX1O00570 391 aaPredicted RBP18.46■□□□□ 0.55
ATG4D-205ENST00000586477 JAK2O60674 1132 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 C6orf222P0C671 652 aaPredicted RBP18.46■□□□□ 0.55
ATG4D-205ENST00000586477 GJB2P29033 226 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 GNA11P29992 359 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 NAPAP54920 295 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 TNFAIP2Q03169 654 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 TLE2Q04725 743 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 MCTP2Q6DN12 878 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 BICD2Q8TD16 824 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 BRMS1Q9HCU9 246 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 VTA1Q9NP79 307 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 PDLIM7Q9NR12 457 aa18.46■□□□□ 0.55
ATG4D-205ENST00000586477 MAP3K20Q9NYL2 800 aaKnown RBP18.46■□□□□ 0.55
ATG4D-205ENST00000586477 RBM47A0AV96 593 aaKnown RBP18.45■□□□□ 0.54
ATG4D-205ENST00000586477 ESYT2A0FGR8 921 aa18.45■□□□□ 0.54
ATG4D-205ENST00000586477 TRIM43BA6NCK2 446 aa18.45■□□□□ 0.54
ATG4D-205ENST00000586477 MDM2Q00987 491 aaPredicted RBP18.45■□□□□ 0.54
ATG4D-205ENST00000586477 BEX3Q00994 111 aa18.45■□□□□ 0.54
ATG4D-205ENST00000586477 PKN1Q16512 942 aa18.45■□□□□ 0.54
ATG4D-205ENST00000586477 TRIM43Q96BQ3 446 aaPredicted RBP18.45■□□□□ 0.54
ATG4D-205ENST00000586477 C8orf76Q96K31 380 aa18.45■□□□□ 0.54
ATG4D-205ENST00000586477 UBE2OQ9C0C9 1292 aaKnown RBP18.45■□□□□ 0.54
ATG4D-205ENST00000586477 C6orf50Q9HD87 102 aa18.45■□□□□ 0.54
ATG4D-205ENST00000586477 ADD3Q9UEY8 706 aaKnown RBP18.45■□□□□ 0.54
ATG4D-205ENST00000586477 KIAA1217Q5T5P2 1943 aa18.45■□□□□ 0.54
ATG4D-205ENST00000586477 LOC102724159A0A0B4J2E5 919 aa18.44■□□□□ 0.54
ATG4D-205ENST00000586477 hCG_1642624A0A1W2PR95 340 aa18.44■□□□□ 0.54
ATG4D-205ENST00000586477 MOXD2PA6NHM9 499 aa18.44■□□□□ 0.54
ATG4D-205ENST00000586477 ASGR1P07306 291 aa18.44■□□□□ 0.54
ATG4D-205ENST00000586477 FDPSP14324 419 aaKnown RBP18.44■□□□□ 0.54
ATG4D-205ENST00000586477 MRPL12P52815 198 aaKnown RBP18.44■□□□□ 0.54
ATG4D-205ENST00000586477 PWP2Q15269 919 aaKnown RBP18.44■□□□□ 0.54
ATG4D-205ENST00000586477 SAFBQ15424 915 aaKnown RBP eCLIP18.44■□□□□ 0.54
ATG4D-205ENST00000586477 WWC2Q6AWC2 1192 aa18.44■□□□□ 0.54
ATG4D-205ENST00000586477 SYTL5Q8TDW5 730 aaPredicted RBP18.44■□□□□ 0.54
ATG4D-205ENST00000586477 CUL5Q93034 780 aa18.44■□□□□ 0.54
ATG4D-205ENST00000586477 H3BQV1 296 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 STXBP3O00186 592 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 ITGB8P26012 769 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 CDK7P50613 346 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 GNASQ5JWF2 1037 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 LARP1BQ659C4 914 aaKnown RBP18.43■□□□□ 0.54
ATG4D-205ENST00000586477 IQSEC1Q6DN90 963 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 TLK2Q86UE8 772 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 DNERQ8NFT8 737 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 LRCH3Q96II8 777 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 IPO9Q96P70 1041 aaKnown RBP18.43■□□□□ 0.54
ATG4D-205ENST00000586477 TAAR1Q96RJ0 339 aa18.43■□□□□ 0.54
ATG4D-205ENST00000586477 ADCY7P51828 1080 aa18.42■□□□□ 0.54
ATG4D-205ENST00000586477 NLRP5P59047 1200 aa18.42■□□□□ 0.54
ATG4D-205ENST00000586477 GHRHRQ02643 423 aa18.42■□□□□ 0.54
ATG4D-205ENST00000586477 TDHQ8IZJ6 230 aa18.42■□□□□ 0.54
ATG4D-205ENST00000586477 GPKOWQ92917 476 aaPredicted RBP eCLIP18.42■□□□□ 0.54
ATG4D-205ENST00000586477 ZMYND12Q9H0C1 365 aa18.42■□□□□ 0.54
ATG4D-205ENST00000586477 PSTPIP2Q9H939 334 aa18.42■□□□□ 0.54
ATG4D-205ENST00000586477 STARD7Q9NQZ5 370 aa18.42■□□□□ 0.54
ATG4D-205ENST00000586477 DYNC1LI2O43237 492 aaPredicted RBP18.41■□□□□ 0.54
ATG4D-205ENST00000586477 PPFIA3O75145 1194 aa18.41■□□□□ 0.54
ATG4D-205ENST00000586477 FAAP100Q0VG06 881 aa18.41■□□□□ 0.54
ATG4D-205ENST00000586477 DUSP28Q4G0W2 176 aa18.41■□□□□ 0.54
ATG4D-205ENST00000586477 ANKRD33Q7Z3H0 272 aa18.41■□□□□ 0.54
ATG4D-205ENST00000586477 PCSK9Q8NBP7 692 aaKnown RBP18.41■□□□□ 0.54
ATG4D-205ENST00000586477 FBXO18Q8NFZ0 1043 aa18.41■□□□□ 0.54
ATG4D-205ENST00000586477 LBHD1Q9BQE6 289 aaPredicted RBP18.41■□□□□ 0.54
ATG4D-205ENST00000586477 VPS54Q9P1Q0 977 aa18.41■□□□□ 0.54
ATG4D-205ENST00000586477 PRKAG2Q9UGJ0 569 aa18.41■□□□□ 0.54
ATG4D-205ENST00000586477 GRIN2DO15399 1336 aa18.41■□□□□ 0.54
ATG4D-205ENST00000586477 ELP1O95163 1332 aa18.41■□□□□ 0.54
ATG4D-205ENST00000586477 SMCO2A6NFE2 343 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 PIK3CDO00329 1044 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 PQBP1O60828 265 aaKnown RBP18.4■□□□□ 0.54
ATG4D-205ENST00000586477 ARIH2O95376 493 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms