RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.13
ERCC2-207ENST00000586441 TBX21Q9UL17 535 aa14.27□□□□□ -0.13
ERCC2-207ENST00000586441 DDX49Q9Y6V7 483 aaKnown RBP14.27□□□□□ -0.13
ERCC2-207ENST00000586441 HSP90AA1P07900 732 aaKnown RBP14.26□□□□□ -0.13
ERCC2-207ENST00000586441 SUPT20HL2P0C7V6 817 aa14.26□□□□□ -0.13
ERCC2-207ENST00000586441 HSPA4P34932 840 aa14.26□□□□□ -0.13
ERCC2-207ENST00000586441 PURAQ00577 322 aaKnown RBP14.26□□□□□ -0.13
ERCC2-207ENST00000586441 PTPN11Q06124 597 aaPredicted RBP14.26□□□□□ -0.13
ERCC2-207ENST00000586441 XRRA1Q6P2D8 792 aa14.26□□□□□ -0.13
ERCC2-207ENST00000586441 OR6J1Q8NGC5 347 aa14.26□□□□□ -0.13
ERCC2-207ENST00000586441 BADQ92934 168 aa14.26□□□□□ -0.13
ERCC2-207ENST00000586441 PRDM5Q9NQX1 630 aaPredicted RBP14.26□□□□□ -0.13
ERCC2-207ENST00000586441 RBM28Q9NW13 759 aaKnown RBP14.26□□□□□ -0.13
ERCC2-207ENST00000586441 SCN10AQ9Y5Y9 1956 aa14.25□□□□□ -0.13
ERCC2-207ENST00000586441 GRIN2DO15399 1336 aa14.25□□□□□ -0.13
ERCC2-207ENST00000586441 FRMPD4Q14CM0 1322 aa14.25□□□□□ -0.13
ERCC2-207ENST00000586441 GH1P01241 217 aa14.25□□□□□ -0.13
ERCC2-207ENST00000586441 TMEM63BQ5T3F8 832 aa14.25□□□□□ -0.13
ERCC2-207ENST00000586441 MFSD5Q6N075 450 aa14.25□□□□□ -0.13
ERCC2-207ENST00000586441 APOA5Q6Q788 366 aa14.25□□□□□ -0.13
ERCC2-207ENST00000586441 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
ERCC2-207ENST00000586441 SRBD1Q8N5C6 995 aaKnown RBP14.25□□□□□ -0.13
ERCC2-207ENST00000586441 MTG1Q9BT17 334 aaPredicted RBP14.25□□□□□ -0.13
ERCC2-207ENST00000586441 DDX41Q9UJV9 622 aaKnown RBP14.25□□□□□ -0.13
ERCC2-207ENST00000586441 EIF2AK2P19525 551 aaKnown RBP14.24□□□□□ -0.13
ERCC2-207ENST00000586441 ITGB8P26012 769 aa14.24□□□□□ -0.13
ERCC2-207ENST00000586441 FPGSQ05932 587 aa14.24□□□□□ -0.13
ERCC2-207ENST00000586441 LAMC2Q13753 1193 aa14.24□□□□□ -0.13
ERCC2-207ENST00000586441 PGM5Q15124 567 aa14.24□□□□□ -0.13
ERCC2-207ENST00000586441 ADCK5Q3MIX3 580 aa14.24□□□□□ -0.13
ERCC2-207ENST00000586441 FAM109BQ6ICB4 259 aaPredicted RBP14.24□□□□□ -0.13
ERCC2-207ENST00000586441 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
ERCC2-207ENST00000586441 TMTC3Q6ZXV5 915 aa14.24□□□□□ -0.13
ERCC2-207ENST00000586441 CUL5Q93034 780 aa14.24□□□□□ -0.13
ERCC2-207ENST00000586441 LAMA3Q16787 3333 aa14.23□□□□□ -0.13
ERCC2-207ENST00000586441 ARIH2O95376 493 aa14.23□□□□□ -0.13
ERCC2-207ENST00000586441 CASTP20810 708 aaKnown RBP14.23□□□□□ -0.13
ERCC2-207ENST00000586441 PSMA5P28066 241 aa14.23□□□□□ -0.13
ERCC2-207ENST00000586441 CCND2P30279 289 aa14.23□□□□□ -0.13
ERCC2-207ENST00000586441 HOXA13P31271 388 aaPredicted RBP14.23□□□□□ -0.13
ERCC2-207ENST00000586441 COL9A3Q14050 684 aaPredicted RBP14.23□□□□□ -0.13
ERCC2-207ENST00000586441 SEPT14Q6ZU15 432 aa14.23□□□□□ -0.13
ERCC2-207ENST00000586441 TMEM199Q8N511 208 aa14.23□□□□□ -0.13
ERCC2-207ENST00000586441 MYL10Q9BUA6 226 aa14.23□□□□□ -0.13
ERCC2-207ENST00000586441 AGXT2Q9BYV1 514 aa14.23□□□□□ -0.13
ERCC2-207ENST00000586441 MYH7BA7E2Y1 1941 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 CCDC196A0A1B0GTZ2 297 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 hCG_1984214I3L0E3 225 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 SOX1O00570 391 aaPredicted RBP14.22□□□□□ -0.13
ERCC2-207ENST00000586441 MEIS2O14770 477 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 ZBTB43O43298 467 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 PPFIA4O75335 1185 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 RGS20O76081 388 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 PLEKHA8P1O95397 391 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 HOXD8P13378 290 aaPredicted RBP14.22□□□□□ -0.13
ERCC2-207ENST00000586441 ICAM3P32942 547 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 ARHGAP1Q07960 439 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 PPIGQ13427 754 aaKnown RBP eCLIP14.22□□□□□ -0.135e-8■■■■□ 21.1
ERCC2-207ENST00000586441 SHHQ15465 462 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 DGKDQ16760 1214 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 LY6KQ17RY6 165 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 GNPTABQ3T906 1256 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 SESTD1Q86VW0 696 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 ZNF713Q8N859 430 aaPredicted RBP14.22□□□□□ -0.13
ERCC2-207ENST00000586441 PPTC7Q8NI37 304 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 INPP4AQ96PE3 977 aaPredicted RBP14.22□□□□□ -0.13
ERCC2-207ENST00000586441 ALDH8A1Q9H2A2 487 aaPredicted RBP14.22□□□□□ -0.13
ERCC2-207ENST00000586441 PSTPIP2Q9H939 334 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 MRVI1Q9Y6F6 885 aa14.22□□□□□ -0.13
ERCC2-207ENST00000586441 MYL3P08590 195 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 DDIT3P35638 169 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 EVCP57679 992 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 PCNX4Q63HM2 1172 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 FCHSD1Q86WN1 690 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 MICU3Q86XE3 530 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 DHX37Q8IY37 1157 aaKnown RBP14.21□□□□□ -0.13
ERCC2-207ENST00000586441 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 SMARCC2Q8TAQ2 1214 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 AFG1LQ8WV93 481 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 COPS5Q92905 334 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 LRRC2Q9BYS8 371 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 GLT8D2Q9H1C3 349 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 BRPF3Q9ULD4 1205 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 SNX14Q9Y5W7 946 aa14.21□□□□□ -0.13
ERCC2-207ENST00000586441 SPATA31C2B4DYI2 1134 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 MAFGO15525 162 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 B4GALT4O60513 344 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 MMP3P08254 477 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 MYCLP12524 364 aaPredicted RBP14.2□□□□□ -0.14
ERCC2-207ENST00000586441 PTGS1P23219 599 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 SMAD3P84022 425 aaKnown RBP14.2□□□□□ -0.14
ERCC2-207ENST00000586441 FUT2Q10981 343 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 RTN1Q16799 776 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 NBPF20Q3BBV1 942 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 CELF3Q5SZQ8 465 aaKnown RBP14.2□□□□□ -0.14
ERCC2-207ENST00000586441 MYSM1Q5VVJ2 828 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 PPP1R18Q6NYC8 613 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 BLOC1S2Q6QNY1 142 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 LRCH3Q96II8 777 aa14.2□□□□□ -0.14
ERCC2-207ENST00000586441 SENP7Q9BQF6 1050 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms