RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 PLEKHA8P1O95397 391 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 HMGCRP04035 888 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 ALAS1P13196 640 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 SLC35G1Q2M3R5 365 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 OLFML2BQ68BL8 750 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 DPP9Q86TI2 863 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 FBXO11Q86XK2 927 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 CCDC144CPQ8IYA2 1237 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 ANKRD35Q8N283 1001 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 SRBD1Q8N5C6 995 aaKnown RBP9.28□□□□□ -0.92
SMAD4-204ENST00000586253 MSL3Q8N5Y2 521 aaKnown RBP9.28□□□□□ -0.92
SMAD4-204ENST00000586253 SAMD3Q8N6K7 520 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 RGS22Q8NE09 1264 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 RRP36Q96EU6 259 aaKnown RBP9.28□□□□□ -0.92
SMAD4-204ENST00000586253 VAT1LQ9HCJ6 419 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 HOMER2Q9NSB8 354 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 FAM217BQ9NTX9 383 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-204ENST00000586253 SEC63Q9UGP8 760 aaKnown RBP9.28□□□□□ -0.92
SMAD4-204ENST00000586253 MRPL11Q9Y3B7 192 aaKnown RBP9.28□□□□□ -0.92
SMAD4-204ENST00000586253 PLXNA1Q9UIW2 1896 aa9.28□□□□□ -0.92
SMAD4-204ENST00000586253 RBBP6Q7Z6E9 1792 aaKnown RBP9.27□□□□□ -0.92
SMAD4-204ENST00000586253 FAM187AA6NFU0 413 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 ST8SIA5O15466 376 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 COBLO75128 1261 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 IGHA2P01877 340 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 CYP2B6P20813 491 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 PDIA3P30101 505 aaKnown RBP9.27□□□□□ -0.93
SMAD4-204ENST00000586253 NEK4P51957 841 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 UBXN2AP68543 259 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 GHRHRQ02643 423 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 FUT2Q10981 343 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 RABEP1Q15276 862 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 ZNF792Q3KQV3 632 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 USH1GQ495M9 461 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 HOMER1Q86YM7 354 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 MCF2L2Q86YR7 1114 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 RAB11FIP4Q86YS3 637 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 CLEC4DQ8WXI8 215 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 DDX11Q96FC9 970 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 ABHD8Q96I13 439 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 ZNF333Q96JL9 665 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 PIGSQ96S52 555 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 KIF2CQ99661 725 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 A1CFQ9NQ94 594 aaKnown RBP9.27□□□□□ -0.93
SMAD4-204ENST00000586253 NAP1L2Q9ULW6 460 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-204ENST00000586253 CNTNAP5Q8WYK1 1306 aa9.27□□□□□ -0.93
SMAD4-204ENST00000586253 LOC102724159A0A0B4J2E5 919 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 hCG_1984214I3L0E3 225 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 NFIBO00712 420 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 PPP1R11O60927 126 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-204ENST00000586253 PGK2P07205 417 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 ELNP15502 786 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 CDC27P30260 824 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 ADD1P35611 737 aaKnown RBP9.26□□□□□ -0.93
SMAD4-204ENST00000586253 GCGRP47871 477 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 RPIAP49247 311 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 AK2P54819 239 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 PWP2Q15269 919 aaKnown RBP9.26□□□□□ -0.93
SMAD4-204ENST00000586253 MUM1L1Q5H9M0 696 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 MAP3K21Q5TCX8 1036 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 TEX2Q8IWB9 1127 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 ZNF713Q8N859 430 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-204ENST00000586253 FAM133AQ8N9E0 248 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 NPLOC4Q8TAT6 608 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 TRIB2Q92519 343 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 MAML3Q96JK9 1138 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 TOR4AQ9NXH8 423 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 MAP3K20Q9NYL2 800 aaKnown RBP9.26□□□□□ -0.93
SMAD4-204ENST00000586253 CYP39A1Q9NYL5 469 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 SLC27A5Q9Y2P5 690 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 PCDHA1Q9Y5I3 950 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 CENPFP49454 3210 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 SYNGAP1Q96PV0 1343 aa9.26□□□□□ -0.93
SMAD4-204ENST00000586253 PFKFB2O60825 505 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 INHAP05111 366 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 IFNAR1P17181 557 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 TAL1P17542 331 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-204ENST00000586253 NTRK3Q16288 839 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 CCL14Q16627 93 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 MFSD14CQ5VZR4 134 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 CPLX2Q6PUV4 134 aaKnown RBP9.25□□□□□ -0.93
SMAD4-204ENST00000586253 MAMDC4Q6UXC1 1216 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 NSMFQ6X4W1 530 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 RNF207Q6ZRF8 634 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 CMTR1Q8N1G2 835 aaKnown RBP9.25□□□□□ -0.93
SMAD4-204ENST00000586253 CRIPAKQ8N1N5 446 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 SH3TC2Q8TF17 1288 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 RNF26Q9BY78 433 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-204ENST00000586253 NRBP1Q9UHY1 535 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 TPCN1Q9ULQ1 816 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 LCTP09848 1927 aa9.25□□□□□ -0.93
SMAD4-204ENST00000586253 PTPDC1A2A3K4 754 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 OPLAHO14841 1288 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 PRPF3O43395 683 aaKnown RBP9.24□□□□□ -0.93
SMAD4-204ENST00000586253 CDKL5O76039 1030 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 AVPP01185 164 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 CAPN2P17655 700 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 HSD17B4P51659 736 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 RPS6P62753 249 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms