RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 SPATA31A1Q5TZJ5 1347 aa6.9□□□□□ -1.3
CRLF3-206ENST00000585268 COL5A2P05997 1499 aaPredicted RBP6.9□□□□□ -1.31
CRLF3-206ENST00000585268 CDK12Q9NYV4 1490 aaPredicted RBP6.9□□□□□ -1.31
CRLF3-206ENST00000585268 LMO7Q8WWI1 1683 aa6.9□□□□□ -1.31
CRLF3-206ENST00000585268 A0A1W2PQH9 124 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 ZEB1P37275 1124 aaPredicted RBP6.89□□□□□ -1.31
CRLF3-206ENST00000585268 AFMP43652 599 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 HK2P52789 917 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 BBS9Q3SYG4 887 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 AXDND1Q5T1B0 1012 aaPredicted RBP6.89□□□□□ -1.31
CRLF3-206ENST00000585268 DCAF15Q66K64 600 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 TOM1L2Q6ZVM7 507 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 ZSWIM9Q86XI8 627 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 C7orf61Q8IZ16 206 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 IP6K1Q92551 441 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 LTV1Q96GA3 475 aaPredicted RBP6.89□□□□□ -1.31
CRLF3-206ENST00000585268 FOXP3Q9BZS1 431 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 CAPN10Q9HC96 672 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 CHST7Q9NS84 486 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 FAM86C1Q9NVL1 165 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 PRR13Q9NZ81 148 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 FBXL21Q9UKT6 434 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 NRAPQ86VF7 1730 aa6.89□□□□□ -1.31
CRLF3-206ENST00000585268 COL18A1P39060 1754 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.88□□□□□ -1.31
CRLF3-206ENST00000585268 NWD2Q9ULI1 1742 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 USP54Q70EL1 1684 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 WDR17Q8IZU2 1322 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 E9PSI1 815 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 HPXP02790 462 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 HOXC9P31274 260 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 CTSKP43235 329 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 AMPHP49418 695 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 ERVFC1P60507 584 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 CNGB1Q14028 1251 aaPredicted RBP6.88□□□□□ -1.31
CRLF3-206ENST00000585268 RNF111Q6ZNA4 994 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 KRTAP1-3Q8IUG1 177 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 TCP11L2Q8N4U5 519 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 LINC00116Q8NCU8 138 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 CPLX3Q8WVH0 158 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 SP110Q9HB58 689 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 EBF1Q9UH73 591 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 TCFL5Q9UL49 500 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 SLC12A7Q9Y666 1083 aa6.88□□□□□ -1.31
CRLF3-206ENST00000585268 CRB1P82279 1406 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 TMEM82A0PJX8 343 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 TP53P04637 393 aaPredicted RBP6.87□□□□□ -1.31
CRLF3-206ENST00000585268 PCBP3P57721 371 aaKnown RBP6.87□□□□□ -1.31
CRLF3-206ENST00000585268 KCNMB1Q16558 191 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 HSP90AB2PQ58FF8 381 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 CC2D1BQ5T0F9 858 aaKnown RBP6.87□□□□□ -1.31
CRLF3-206ENST00000585268 LCE3BQ5TA77 95 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 MORC1Q86VD1 984 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 PDZD8Q8NEN9 1154 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 KIRREL1Q96J84 757 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 G6PC3Q9BUM1 346 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 PHAXQ9H814 394 aaKnown RBP6.87□□□□□ -1.31
CRLF3-206ENST00000585268 POLKQ9UBT6 870 aa6.87□□□□□ -1.31
CRLF3-206ENST00000585268 ZNF503-AS2A6NEH8 195 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.86□□□□□ -1.31
CRLF3-206ENST00000585268 MEIS1O00470 390 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 PPM1GO15355 546 aaPredicted RBP6.86□□□□□ -1.31
CRLF3-206ENST00000585268 CBFA2T2O43439 604 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 SYPP08247 313 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 CASP7P55210 303 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 CRTC3Q6UUV7 619 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 KRT27Q7Z3Y8 459 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 LINC01599Q8WXQ3 324 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 KLHL6Q8WZ60 621 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 DHX38Q92620 1227 aaKnown RBP6.86□□□□□ -1.31
CRLF3-206ENST00000585268 ANAPC16Q96DE5 110 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 GP6Q9HCN6 339 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 PCDHB10Q9UN67 800 aa6.86□□□□□ -1.31
CRLF3-206ENST00000585268 THRAP3Q9Y2W1 955 aaKnown RBP6.86□□□□□ -1.31
CRLF3-206ENST00000585268 BLMP54132 1417 aaPredicted RBP6.85□□□□□ -1.31
CRLF3-206ENST00000585268 NSD2O96028 1365 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 FKTNO75072 461 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 FGRP09769 529 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 RAC2P15153 192 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 CD247P20963 164 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 RPL10P27635 214 aaKnown RBP6.85□□□□□ -1.31
CRLF3-206ENST00000585268 BMP8BP34820 402 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 ZNF445P59923 1031 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 GNL2Q13823 731 aaKnown RBP6.85□□□□□ -1.31
CRLF3-206ENST00000585268 PPP2R5EQ16537 467 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.85□□□□□ -1.31
CRLF3-206ENST00000585268 ZNF451Q9Y4E5 1061 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 ABCC6O95255 1503 aa6.85□□□□□ -1.31
CRLF3-206ENST00000585268 RTL1A6NKG5 1358 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 INSRP06213 1382 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 FLT4P35916 1363 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 ZNF205O95201 554 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 GLI1P08151 1106 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 TRHRP34981 398 aaPredicted RBP6.84□□□□□ -1.31
CRLF3-206ENST00000585268 DUSP4Q13115 394 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 DDX10Q13206 875 aaKnown RBP6.84□□□□□ -1.31
CRLF3-206ENST00000585268 GNPTABQ3T906 1256 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 TIGD5Q53EQ6 642 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 NBPF6Q5VWK0 638 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms