RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 GLI4P10075 376 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 PABPC1P11940 636 aaKnown RBP5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 KCNJ6P48051 423 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 MAP4K2Q12851 820 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 TARBP2Q15633 366 aaKnown RBP5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 C2orf27AQ580R0 203 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 ACBD5Q5T8D3 534 aaPredicted RBP5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 E4F1Q66K89 784 aaPredicted RBP5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 DENND5AQ6IQ26 1287 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 NSMFQ6X4W1 530 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 SCUBE1Q8IWY4 988 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 KCTD13Q8WZ19 329 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 C20orf173Q96LM9 149 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 IER2Q9BTL4 223 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 BCAS3Q9H6U6 928 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 RAPGEFL1Q9UHV5 662 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 FAN1Q9Y2M0 1017 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 TMA7Q9Y2S6 64 aaKnown RBP5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 IRS2Q9Y4H2 1338 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 C7orf72A4D263 438 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 PRODHO43272 600 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 PPP1R11O60927 126 aaPredicted RBP5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 SASH1O94885 1247 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 FAM153BP0C7A2 387 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 CCDC103Q8IW40 242 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 SYNPOQ8N3V7 929 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 LILRB2Q8N423 598 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 ZSWIM2Q8NEG5 633 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 ALG3Q92685 438 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 OSBP2Q969R2 916 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 NPFFR2Q9Y5X5 522 aa5.9□□□□□ -1.46
PPP4R1-227ENST00000583988 IGFBP6P24592 240 aaPredicted RBP5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 MC3RP41968 323 aa5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 PRSS53Q2L4Q9 553 aa5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 YOD1Q5VVQ6 348 aaPredicted RBP5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 MBLAC2Q68D91 279 aa5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 ZDHHC14Q8IZN3 488 aa5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 FEZF2Q8TBJ5 459 aa5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 IPO9Q96P70 1041 aaKnown RBP5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 BTG4Q9NY30 223 aa5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 TMEFF2Q9UIK5 374 aaPredicted RBP5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 SHROOM4Q9ULL8 1493 aa5.89□□□□□ -1.47
PPP4R1-227ENST00000583988 A0A0G2JLL6 359 aaPredicted RBP5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 B8ZZF3 427 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 NPHS1O60500 1241 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 FUCA1P04066 466 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 ASGR2P07307 311 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 NCAM1P13591 858 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 ATF2P15336 505 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 FBLN1P23142 703 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 FOXO4P98177 505 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 INF2Q27J81 1249 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 FOXB2Q5VYV0 432 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 NLGN1Q8N2Q7 840 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 LINC01356Q8N9X3 169 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 SYT8Q8NBV8 401 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 DIO2Q92813 273 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 MTA3Q9BTC8 594 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 TMEM260Q9NX78 707 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 NUDT5Q9UKK9 219 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 TBX22Q9Y458 520 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 CADPSQ9ULU8 1353 aa5.88□□□□□ -1.47
PPP4R1-227ENST00000583988 OTOL1A6NHN0 477 aaPredicted RBP5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 ENPP3O14638 875 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 MEFVO15553 781 aaPredicted RBP5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 NTRK1P04629 796 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 CANXP27824 592 aaKnown RBP5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 PMLP29590 882 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 FAM209AQ5JX71 171 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 GIMAP6Q6P9H5 292 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 PPIL6Q8IXY8 311 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 SH3TC2Q8TF17 1288 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 DPF3Q92784 378 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 RELTQ969Z4 430 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 PEX11GQ96HA9 241 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 RNPC3Q96LT9 517 aaKnown RBP5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 CDC6Q99741 560 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 DHRS4Q9BTZ2 278 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 RNF38Q9H0F5 515 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 MARCH2Q9P0N8 246 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 SIT1Q9Y3P8 196 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 TIMM13Q9Y5L4 95 aaPredicted RBP5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 PMF1-BGLAPU3KQ54 211 aa5.87□□□□□ -1.47
PPP4R1-227ENST00000583988 TRBV23-1A0A0A0MS06 115 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 FFAR3O14843 346 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 LTBRP36941 435 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 KCNAB2Q13303 367 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 NFIXQ14938 502 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 NTRK3Q16288 839 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 WWC2Q6AWC2 1192 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 RSPO2Q6UXX9 243 aaPredicted RBP5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 SP8Q8IXZ3 490 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 ADGRG2Q8IZP9 1017 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 NETO2Q8NC67 525 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 RCBTB1Q8NDN9 531 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 DCAF4Q8WV16 495 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 APPBP2Q92624 585 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 KISS1RQ969F8 398 aaPredicted RBP5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 XYLT2Q9H1B5 865 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms