RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 TRIB2Q92519 343 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 TNFRSF25Q93038 417 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 JADE2Q9NQC1 790 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 CIZ1Q9ULV3 898 aaPredicted RBP10.61□□□□□ -0.71
UBBP4-201ENST00000583708 RBM19Q9Y4C8 960 aaKnown RBP10.61□□□□□ -0.71
UBBP4-201ENST00000583708 UBIAD1Q9Y5Z9 338 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 PTCH2Q9Y6C5 1203 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 ZNFX1Q9P2E3 1918 aaKnown RBP10.6□□□□□ -0.71
UBBP4-201ENST00000583708 DOCK3Q8IZD9 2030 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 BTBD18B2RXH4 712 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 MEIS1O00470 390 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 TBX3O15119 743 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 SEPT4O43236 478 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 FIBPO43427 364 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 PPFIA3O75145 1194 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 AKR1A1P14550 325 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 EIF2AK2P19525 551 aaKnown RBP10.6□□□□□ -0.71
UBBP4-201ENST00000583708 NKX3-2P78367 333 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 CAP1Q01518 475 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 NEDD9Q14511 834 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 Q4G0T1 1027 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 TBCKQ8TEA7 893 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 SHISA4Q96DD7 197 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 MBOAT7Q96N66 472 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 MXRA8Q9BRK3 442 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 KATNBL1Q9H079 304 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 SPC25Q9HBM1 224 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 ATP6V1DQ9Y5K8 247 aa10.6□□□□□ -0.71
UBBP4-201ENST00000583708 SMCHD1A6NHR9 2005 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 SPATA31C2B4DYI2 1134 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 LAD1O00515 517 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 KPNA6O60684 536 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 DUSP11O75319 330 aaKnown RBP10.59□□□□□ -0.71
UBBP4-201ENST00000583708 INHAP05111 366 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 ZNF865P0CJ78 1059 aaPredicted RBP10.59□□□□□ -0.71
UBBP4-201ENST00000583708 MYCLP12524 364 aaPredicted RBP10.59□□□□□ -0.71
UBBP4-201ENST00000583708 CYBAP13498 195 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
UBBP4-201ENST00000583708 CYP2C19P33261 490 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 MRPS9P82933 396 aaKnown RBP10.59□□□□□ -0.71
UBBP4-201ENST00000583708 CACNB2Q08289 660 aaPredicted RBP10.59□□□□□ -0.71
UBBP4-201ENST00000583708 CCL14Q16627 93 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 DUSP28Q4G0W2 176 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 BRDTQ58F21 947 aaPredicted RBP10.59□□□□□ -0.71
UBBP4-201ENST00000583708 EMID1Q96A84 441 aaPredicted RBP10.59□□□□□ -0.71
UBBP4-201ENST00000583708 FAM20AQ96MK3 541 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 SEZ6LQ9BYH1 1024 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 TSHZ2Q9NRE2 1034 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 TBC1D22BQ9NU19 505 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 FLRT1Q9NZU1 646 aa10.59□□□□□ -0.71
UBBP4-201ENST00000583708 MORC2Q9Y6X9 1032 aaPredicted RBP10.59□□□□□ -0.71
UBBP4-201ENST00000583708 ASTN1O14525 1302 aa10.58□□□□□ -0.71
UBBP4-201ENST00000583708 PLXNB2O15031 1838 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 BAG4O95429 457 aaKnown RBP10.58□□□□□ -0.72
UBBP4-201ENST00000583708 GJB1P08034 283 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 ELNP15502 786 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 TAL1P17542 331 aaPredicted RBP10.58□□□□□ -0.72
UBBP4-201ENST00000583708 GUCY1B3Q02153 619 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 TNFAIP2Q03169 654 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 NR5A1Q13285 461 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 LAMC2Q13753 1193 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 MCTP1Q6DN14 999 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 TAPT1Q6NXT6 567 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 CCDC62Q6P9F0 684 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 PIK3AP1Q6ZUJ8 805 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 SLFN12Q8IYM2 578 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 ARRDC4Q8NCT1 418 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 ZNF333Q96JL9 665 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 RIT2Q99578 217 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 MCOLN1Q9GZU1 580 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 TMEM260Q9NX78 707 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 CEP131Q9UPN4 1083 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 MTMR6Q9Y217 621 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 NFASCO94856 1347 aa10.58□□□□□ -0.72
UBBP4-201ENST00000583708 VPS37CA5D8V6 355 aaPredicted RBP10.57□□□□□ -0.72
UBBP4-201ENST00000583708 ZEB2O60315 1214 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 GH1P01241 217 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 ZSCAN22P10073 491 aaPredicted RBP10.57□□□□□ -0.72
UBBP4-201ENST00000583708 RARBP10826 455 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 MTMR1Q13613 665 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 CCDC144BQ3MJ40 725 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 PLA2G4DQ86XP0 818 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 ANKLE1Q8NAG6 615 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 RDM1Q8NG50 284 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 RASGRP4Q8TDF6 673 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 IPO9Q96P70 1041 aaKnown RBP10.57□□□□□ -0.72
UBBP4-201ENST00000583708 PURBQ96QR8 312 aaKnown RBP10.57□□□□□ -0.72
UBBP4-201ENST00000583708 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 WDR11Q9BZH6 1224 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 AP5M1Q9H0R1 490 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 PAK6Q9NQU5 681 aaPredicted RBP10.57□□□□□ -0.72
UBBP4-201ENST00000583708 KCNH7Q9NS40 1196 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 GJB4Q9NTQ9 266 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 DDX20Q9UHI6 824 aaKnown RBP10.57□□□□□ -0.72
UBBP4-201ENST00000583708 TCEAL9Q9UHQ7 104 aa10.57□□□□□ -0.72
UBBP4-201ENST00000583708 DDX41Q9UJV9 622 aaKnown RBP10.57□□□□□ -0.72
UBBP4-201ENST00000583708 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
UBBP4-201ENST00000583708 MRVI1Q9Y6F6 885 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms