RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 NDUFB10O96000 172 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 PTGS1P23219 599 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 CIITAP33076 1130 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 SARSP49591 514 aaKnown RBP11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 COPB1P53618 953 aaKnown RBP11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 DPCR1Q3MIW9 517 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 SH3RF1Q7Z6J0 888 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 OR8K1Q8NGG5 319 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 NOC4LQ9BVI4 516 aaKnown RBP11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 MYOZ2Q9NPC6 264 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 LCMT1Q9UIC8 334 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 MYH2Q9UKX2 1941 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 MAPTP10636 758 aaKnown RBP11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 CAP2P40123 477 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 KIAA1524Q8TCG1 905 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 IFT74Q96LB3 600 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 PANK4Q9NVE7 773 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 PSMD14O00487 310 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 GFPT2O94808 682 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 DESP17661 470 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 PRELPP51888 382 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 C11orf57Q6ZUT1 292 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 MIER3Q7Z3K6 550 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 FAM167AQ96KS9 214 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 UBA5Q9GZZ9 404 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 SLC16A3O15427 465 aaKnown RBP11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 CHGBP05060 677 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 TBC1D8BQ0IIM8 1120 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 EDRF1Q3B7T1 1238 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 MTMR8Q96EF0 704 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 WDR18Q9BV38 432 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 TACC1O75410 805 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 LMNB1P20700 586 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 GUCY1A2P33402 732 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 LRCH2Q5VUJ6 765 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 FAM160B1Q5W0V3 765 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 GPBP1Q86WP2 473 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 DHX40Q8IX18 779 aaKnown RBP11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 SYCP3Q8IZU3 236 aa11.23□□□□□ -0.61
TRAPPC8-211ENST00000582539 DLEC1Q9Y238 1755 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 EIF3DO15371 548 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 BCRP11274 1271 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 PLCG1P19174 1290 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 TECP42680 631 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 ERO1AQ96HE7 468 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 GJA3Q9Y6H8 435 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 PFASO15067 1338 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 A0A1B0GUL6 1792 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 EIF3JO75822 258 aaKnown RBP11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 EYA4O95677 639 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 ICAM1P05362 532 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 TOB1P50616 345 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 FIGNQ5HY92 759 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 SLC44A5Q8NCS7 719 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 TAF4BQ92750 862 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 HAUS4Q9H6D7 363 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 C17orf75Q9HAS0 396 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 KBTBD4Q9NVX7 518 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 RAD17O75943 681 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 CHRNA5P30532 468 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 CETN2P41208 172 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 NCAPH2Q6IBW4 605 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 FASTKD5Q7L8L6 764 aaKnown RBP11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 SCYL3Q8IZE3 742 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 STAG2Q8N3U4 1231 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 UBXN4Q92575 508 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 GPR101Q96P66 508 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 PLVAPQ9BX97 442 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 ZSWIM4Q9H7M6 989 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 KIAA1586Q9HCI6 787 aa11.22□□□□□ -0.61
TRAPPC8-211ENST00000582539 SLU7O95391 586 aaKnown RBP11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 PPP2R5EQ16537 467 aa11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 NOM1Q5C9Z4 860 aaKnown RBP11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 HYIQ5T013 277 aa11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 LGALS16A8MUM7 142 aa11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 SLC4A8Q2Y0W8 1093 aa11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 CCDC174Q6PII3 467 aa11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 ZNF592Q92610 1267 aa11.21□□□□□ -0.61
TRAPPC8-211ENST00000582539 UQCRHLA0A096LP55 91 aa11.21□□□□□ -0.62
TRAPPC8-211ENST00000582539 A0A0G2JLW4 131 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms