RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	FUCA1	P04066	466 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	C1QTNF9	P0C862	333 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	PABPC1	P11940	636 aa	Known RBP	4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	NSMF	Q6X4W1	530 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	ANKLE2	Q86XL3	938 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453		Q8N1Y9	231 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	RCBTB1	Q8NDN9	531 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	PMFBP1	Q8TBY8	1022 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	PLEKHO2	Q8TD55	490 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	OSBP2	Q969R2	916 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	PEX11G	Q96HA9	241 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	DNAJC2	Q99543	621 aa	Known RBP	4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	CNTD2	Q9H8S5	307 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	SNTG2	Q9NY99	539 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	MARCH2	Q9P0N8	246 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	FBLN5	Q9UBX5	448 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	DBR1	Q9UK59	544 aa	Known RBP	4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	NUDT5	Q9UKK9	219 aa		4.69	□□□□□ -1.66
MSI2-215	ENST00000582453	FAM221B	A6H8Z2	402 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	DBX1	A6NMT0	343 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	C22orf46	C9J442	243 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453		F8W031	263 aa	Predicted RBP	4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	N4BP3	O15049	544 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	PRODH	O43272	600 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	BCL6	P41182	706 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	SLC9A5	Q14940	896 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	LONRF2	Q1L5Z9	754 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	MROH9	Q5TGP6	573 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	DPH6	Q7L8W6	267 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	DCP2	Q8IU60	420 aa	Known RBP	4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	RIOX2	Q8IUF8	465 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	TEX2	Q8IWB9	1127 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	TSPAN17	Q96FV3	270 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	TMEM169	Q96HH4	297 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	SRPK1	Q96SB4	655 aa	Known RBP	4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	SGPP1	Q9BX95	441 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	GPR27	Q9NS67	375 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	BTG4	Q9NY30	223 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	PFDN2	Q9UHV9	154 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	SMG5	Q9UPR3	1016 aa	Known RBP	4.68	□□□□□ -1.66
MSI2-215	ENST00000582453		X6R8D5	127 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	CEP170	Q5SW79	1584 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	KIF21B	O75037	1637 aa		4.68	□□□□□ -1.66
MSI2-215	ENST00000582453	ZC3H12D	A2A288	527 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-215	ENST00000582453		H7BY64	318 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	DIAPH1	O60610	1272 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	ZBTB7A	O95365	584 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	NTRK1	P04629	796 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	LCP1	P13796	627 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	CDR1	P51861	262 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	PRR5	P85299	388 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	LSAMP	Q13449	338 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	KCNA10	Q16322	511 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	USP53	Q70EK8	1073 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	CEP68	Q76N32	757 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	NLRP10	Q86W26	655 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	LDHD	Q86WU2	507 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	CILP2	Q8IUL8	1156 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	SCUBE1	Q8IWY4	988 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	MZB1	Q8WU39	189 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	DCAF4	Q8WV16	495 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	TRMT2B	Q96GJ1	504 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	SIGLEC10	Q96LC7	697 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	TOX2	Q96NM4	488 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	IPO9	Q96P70	1041 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	CDC6	Q99741	560 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	OSBPL2	Q9H1P3	480 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	PCDHA2	Q9Y5H9	948 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	GOLGA3	Q08378	1498 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	KDM2B	Q8NHM5	1336 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	IRS2	Q9Y4H2	1338 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	UGGT2	Q9NYU1	1516 aa		4.67	□□□□□ -1.66
MSI2-215	ENST00000582453	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	SHROOM2	Q13796	1616 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	NPIPB6	E9PJ23	425 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	PFKL	P17858	780 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	FPR2	P25090	351 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	SLC6A11	P48066	632 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	EPHB3	P54753	998 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	LINC00310	P59036	64 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	ZNF200	P98182	395 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	TARBP2	Q15633	366 aa	Known RBP	4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	NFE2L2	Q16236	605 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	STYK1	Q6J9G0	422 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	JMY	Q8N9B5	988 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	SEC14L1	Q92503	715 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	ZFYVE21	Q9BQ24	234 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	PHF20	Q9BVI0	1012 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	RNF38	Q9H0F5	515 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	AP5M1	Q9H0R1	490 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	CNOT6	Q9ULM6	557 aa	Known RBP	4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	COA3	Q9Y2R0	106 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	PCDHA5	Q9Y5H7	936 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	HCFC2	Q9Y5Z7	792 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	IRAK3	Q9Y616	596 aa		4.66	□□□□□ -1.66
MSI2-215	ENST00000582453	TRBV23-1	A0A0A0MS06	115 aa		4.65	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms