RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 MYCLP12524 364 aaPredicted RBP16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 CCND2P30279 289 aa16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 RCAN1P53805 252 aa16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 RTN1Q16799 776 aa16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 LY6KQ17RY6 165 aa16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 BLOC1S2Q6QNY1 142 aa16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 CCDC82Q8N4S0 544 aa16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 MTG1Q9BT17 334 aaPredicted RBP16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 DDX41Q9UJV9 622 aaKnown RBP16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 KLF18A0A0U1RQI7 1052 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 PIK3CDO00329 1044 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 SOX1O00570 391 aaPredicted RBP16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 RGS20O76081 388 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 TIMP1P01033 207 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 PSMC6P62333 389 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 FGD1P98174 961 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 KCNV1Q6PIU1 500 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 IL31RAQ8NI17 732 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 CUL5Q93034 780 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 MRVI1Q9Y6F6 885 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 FRMPD4Q14CM0 1322 aa16.2■□□□□ 0.18
SUPT4H1-205ENST00000581166 MEIS2O14770 477 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 CPA1P15085 419 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 PSMA5P28066 241 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 ARHGAP1Q07960 439 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 Q6ZUG5 572 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 FBXL16Q8N461 479 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 SZT2Q5T011 3432 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 CNTNAP5Q8WYK1 1306 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 hCG_1642624A0A1W2PR95 340 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 GOLGA8AA7E2F4 631 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 GOLGA8BA8MQT2 603 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 STAM2O75886 525 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 RPS6KB1P23443 525 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 USP17L6PQ6QN14 398 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 AFG1LQ8WV93 481 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 EMID1Q96A84 441 aaPredicted RBP16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 LRCH3Q96II8 777 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 USP26Q9BXU7 913 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 PSTPIP2Q9H939 334 aa16.19■□□□□ 0.18
SUPT4H1-205ENST00000581166 SCN10AQ9Y5Y9 1956 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 MMP3P08254 477 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 TGFB3P10600 412 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 FPGSQ05932 587 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 FUT2Q10981 343 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 LAMC2Q13753 1193 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 SHHQ15465 462 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 MFSD5Q6N075 450 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 HEATR3Q7Z4Q2 680 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 DHX37Q8IY37 1157 aaKnown RBP16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 BRF1Q92994 677 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 AGXT2Q9BYV1 514 aa16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 ALDH8A1Q9H2A2 487 aaPredicted RBP16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 FAM217BQ9NTX9 383 aaPredicted RBP16.18■□□□□ 0.18
SUPT4H1-205ENST00000581166 CCDC196A0A1B0GTZ2 297 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 B4GALT4O60513 344 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 CASTP20810 708 aaKnown RBP16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 CDC27P30260 824 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 MRPS9P82933 396 aaKnown RBP16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 APOBRQ0VD83 1088 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 DGKDQ16760 1214 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 NBPF20Q3BBV1 942 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 C9orf50Q5SZB4 431 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 GPR153Q6NV75 609 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 NFRKBQ6P4R8 1299 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 TRPV6Q9H1D0 765 aa16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 NAP1L2Q9ULW6 460 aaPredicted RBP16.17■□□□□ 0.18
SUPT4H1-205ENST00000581166 LAMA2P24043 3122 aaKnown RBP16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 MYH7BA7E2Y1 1941 aa16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 SUPT20HL2P0C7V6 817 aa16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 METAP2P50579 478 aaKnown RBP eCLIP16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 EPHB4P54760 987 aa16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 PTPN11Q06124 597 aaPredicted RBP16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 GNPTABQ3T906 1256 aa16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 CELF3Q5SZQ8 465 aaKnown RBP16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 MYSM1Q5VVJ2 828 aa16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 PCNX4Q63HM2 1172 aa16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 XRRA1Q6P2D8 792 aa16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 PPTC7Q8NI37 304 aa16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 GPKOWQ92917 476 aaPredicted RBP eCLIP16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 INPP4AQ96PE3 977 aaPredicted RBP16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 PPP1R12CQ9BZL4 782 aa16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
SUPT4H1-205ENST00000581166 hCG_1984214I3L0E3 225 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 UBA1P22314 1058 aaKnown RBP16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 ICAM3P32942 547 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 ADD1P35611 737 aaKnown RBP16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 SP2Q02086 613 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 PPIGQ13427 754 aaKnown RBP eCLIP16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 WWC2Q6AWC2 1192 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 RUFY3Q7L099 469 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 TEX2Q8IWB9 1127 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 TMEM199Q8N511 208 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 ZNF713Q8N859 430 aaPredicted RBP16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 HIPK3Q9H422 1215 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 NID2Q14112 1375 aa16.15■□□□□ 0.18
SUPT4H1-205ENST00000581166 GGPS1O95749 300 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms