RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 FCHSD1Q86WN1 690 aa12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 CTAGE1Q96RT6 745 aa12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 IWS1Q96ST2 819 aa12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 LSG1Q9H089 658 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 PRDM12Q9H4Q4 367 aa12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 BCAS3Q9H6U6 928 aa12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 MRVI1Q9Y6F6 885 aa12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-218ENST00000580745 TMEM265A0A087WTH1 108 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 ERICH2A1L162 156 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 KPNA6O60684 536 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 ZNF286BP0CG31 522 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 RXRAP19793 462 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 SP2Q02086 613 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 GHRHRQ02643 423 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 GDF6Q6KF10 455 aaPredicted RBP12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 NFRKBQ6P4R8 1299 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 CMTR1Q8N1G2 835 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 COL25A1Q9BXS0 654 aaPredicted RBP12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 LRRC2Q9BYS8 371 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 LY9Q9HBG7 655 aa12.91□□□□□ -0.34
PPP4R1-218ENST00000580745 PNMA6FA0A0J9YX94 578 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 GCOM1H8Y6P7 765 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 SLC27A2O14975 620 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 IQCF3P0C7M6 154 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 POLR2MP0CAP2 368 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 ZNF200P98182 395 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 ADGRE1Q14246 886 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 PGM5Q15124 567 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 PTGISQ16647 500 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 CATIPQ7Z7H3 387 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 VSIG10LQ86VR7 867 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 RPUSD2Q8IZ73 545 aaKnown RBP12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 PPM1EQ8WY54 764 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 DHX38Q92620 1227 aaKnown RBP12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 ALG1Q9BT22 464 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 MAF1Q9H063 256 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 PRDM6Q9NQX0 595 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 NOD1Q9Y239 953 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 TELO2Q9Y4R8 837 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 SLC4A7Q9Y6M7 1214 aa12.9□□□□□ -0.34
PPP4R1-218ENST00000580745 hCG_1642624A0A1W2PR95 340 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 PRC1O43663 620 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 PSEN2P49810 448 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 HIC1Q14526 733 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 GPNMBQ14956 572 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 SART3Q15020 963 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 HSDL1Q3SXM5 330 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 DHX37Q8IY37 1157 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 ZNF654Q8IZM8 581 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 WNT8BQ93098 351 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 ESYT1Q9BSJ8 1104 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 HDAC6Q9UBN7 1215 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 MSRAQ9UJ68 235 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 CDH23Q9H251 3354 aa12.89□□□□□ -0.35
PPP4R1-218ENST00000580745 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 SH2B2O14492 632 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 ARHGEF15O94989 841 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 GGPS1O95749 300 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 UBA1P22314 1058 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 MRPS9P82933 396 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 PTPN11Q06124 597 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 MFSD10Q14728 455 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 DGKDQ16760 1214 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 TCTN1Q2MV58 587 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 CELF3Q5SZQ8 465 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 MYSM1Q5VVJ2 828 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 CREB3L3Q68CJ9 461 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 USP17L6PQ6QN14 398 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 SRBD1Q8N5C6 995 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 RETREG2Q8NC44 543 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 EMID1Q96A84 441 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 FTOQ9C0B1 505 aaKnown RBP eCLIP12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 MTIF3Q9H2K0 278 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 ANO2Q9NQ90 1003 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 RTEL1Q9NZ71 1219 aa12.88□□□□□ -0.35
PPP4R1-218ENST00000580745 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 CCND2P30279 289 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 RAB30Q15771 203 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 KIAA0753Q2KHM9 967 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 CASC1Q6TDU7 716 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 NFXL1Q6ZNB6 911 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 TMCO2Q7Z6W1 182 aaPredicted RBP12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 CCDC82Q8N4S0 544 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 SPATA33Q96N06 139 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 CERS4Q9HA82 394 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 GTF2IRD1Q9UHL9 959 aa12.87□□□□□ -0.35
PPP4R1-218ENST00000580745 HAS3O00219 553 aa12.86□□□□□ -0.35
PPP4R1-218ENST00000580745 RFXAPO00287 272 aa12.86□□□□□ -0.35
PPP4R1-218ENST00000580745 PITPNM1O00562 1244 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms