RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CTNNA3Q9UI47 895 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 TNNQ9UQP3 1299 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 GVINP1Q7Z2Y8 2422 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 MYO7AQ13402 2215 aa9.23□□□□□ -0.93
SMARCE1-217ENST00000580654 DMXL1Q9Y485 3027 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 CHD6Q8TD26 2715 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 ABHD14A-ACY1A0A1B0GW23 586 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 RBM47A0AV96 593 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 USP17L21D6R901 530 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 E9PSI1 815 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 H0Y858 1186 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 STXBP3O00186 592 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 TBX10O75333 385 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 ID4P47928 161 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 PTPN11Q06124 597 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 GPM6BQ13491 265 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 PTPROQ16827 1216 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 TRAF7Q6Q0C0 670 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 LRRC8DQ7L1W4 858 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 SSH3Q8TE77 659 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 ASIC4Q96FT7 647 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 POP1Q99575 1024 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 TLR9Q9NR96 1032 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 RNF146Q9NTX7 359 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 NYAP2Q9P242 653 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 COG6Q9Y2V7 657 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 CFAP47Q6ZTR5 3102 aa9.22□□□□□ -0.93
SMARCE1-217ENST00000580654 ZNF292O60281 2723 aa9.21□□□□□ -0.93
SMARCE1-217ENST00000580654 TPRP12270 2363 aaKnown RBP9.21□□□□□ -0.93
SMARCE1-217ENST00000580654 IGKV6D-41A0A0C4DH26 115 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 MED19A0JLT2 244 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 SURF6O75683 361 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 SELPP16109 830 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 RASA1P20936 1047 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 AVPR2P30518 371 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 GTF2F1P35269 517 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 CPT1AP50416 773 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 RBL2Q08999 1139 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 HYAL1Q12794 435 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 OS9Q13438 667 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 SMAD4Q13485 552 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 MBTPS1Q14703 1052 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 PTGISQ16647 500 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 MUM1L1Q5H9M0 696 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 GDF6Q6KF10 455 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 OR6J1Q8NGC5 347 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 CAGE1Q8TC20 777 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 COPS5Q92905 334 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 CRBNQ96SW2 442 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 FSD1Q9BTV5 496 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 WDR11Q9BZH6 1224 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 ATP8A2Q9NTI2 1148 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 CYP39A1Q9NYL5 469 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 FEM1BQ9UK73 627 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 NOP58Q9Y2X3 529 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 INSL6Q9Y581 213 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 CTDP1Q9Y5B0 961 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 ZBED9Q6R2W3 1325 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 MYH7P12883 1935 aa9.21□□□□□ -0.94
SMARCE1-217ENST00000580654 DNAH14Q0VDD8 3507 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 NCOR2Q9Y618 2525 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 A6NJR5 290 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 LOC730098B7Z3J9 87 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 LINC01565O15544 149 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 BCAR3O75815 825 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 MBD4O95243 580 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 CHGBP05060 677 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 CKBP12277 381 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 CTR9Q6PD62 1173 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 WNT8BQ93098 351 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 GPHNQ9NQX3 736 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 CLIP2Q9UDT6 1046 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 NOD1Q9Y239 953 aa9.2□□□□□ -0.94
SMARCE1-217ENST00000580654 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 LGR5O75473 907 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 PDGFBP01127 241 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 ALAS1P13196 640 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 NBL1P41271 181 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 ATP8B2P98198 1209 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 SIGLEC14Q08ET2 396 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 IKBKEQ14164 716 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 CBX2Q14781 532 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 TRIM71Q2Q1W2 868 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 SESTD1Q86VW0 696 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 FBXO11Q86XK2 927 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 TMEM192Q8IY95 271 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 TRMT2AQ8IZ69 625 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 FAM9BQ8IZU0 186 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 CCDC155Q8N6L0 562 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 ARHGAP45Q92619 1136 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 MKL1Q969V6 931 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 MSLNLQ96KJ4 702 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 SAMD11Q96NU1 681 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 ACACBO00763 2458 aa9.19□□□□□ -0.94
SMARCE1-217ENST00000580654 NCK2O43639 380 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 KPNA6O60684 536 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 EFCAB14O75071 495 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 PARNO95453 639 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms