RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 RFC2P35250 354 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 TRAF1Q13077 416 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 SART3Q15020 963 aaKnown RBP20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 HOMER1Q86YM7 354 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 SAMD3Q8N6K7 520 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 KAT2BQ92831 832 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 EMID1Q96A84 441 aaPredicted RBP20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 PIGSQ96S52 555 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 NKX2-4Q9H2Z4 354 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 PRDM12Q9H4Q4 367 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 NOD1Q9Y239 953 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 YBX2Q9Y2T7 364 aaKnown RBP20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 MRVI1Q9Y6F6 885 aa20.32■□□□□ 0.84
CSNK1D-214ENST00000580565 ZBBXA8MT70 800 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 IQCF3P0C7M6 154 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 HOXA13P31271 388 aaPredicted RBP20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 RABGGTBP53611 331 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 TROAPQ12815 778 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 BFSP2Q13515 415 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 LAMC2Q13753 1193 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 WTAPQ15007 396 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 PTGISQ16647 500 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 DGKDQ16760 1214 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 GAS2L1Q99501 681 aaPredicted RBP20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 PDCD2LQ9BRP1 358 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 SLC28A3Q9HAS3 691 aa20.31■□□□□ 0.84
CSNK1D-214ENST00000580565 MYCLP12524 364 aaPredicted RBP20.3■□□□□ 0.84
CSNK1D-214ENST00000580565 ATP2A2P16615 1042 aaKnown RBP20.3■□□□□ 0.84
CSNK1D-214ENST00000580565 TMEM67Q5HYA8 995 aa20.3■□□□□ 0.84
CSNK1D-214ENST00000580565 CATIPQ7Z7H3 387 aa20.3■□□□□ 0.84
CSNK1D-214ENST00000580565 VSIG10LQ86VR7 867 aa20.3■□□□□ 0.84
CSNK1D-214ENST00000580565 SESTD1Q86VW0 696 aa20.3■□□□□ 0.84
CSNK1D-214ENST00000580565 PRUNE2Q8WUY3 3088 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 PNMA6FA0A0J9YX94 578 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 GCOM1H8Y6P7 765 aaPredicted RBP20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 CYTH3O43739 400 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 RGS20O76081 388 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 POLR2MP0CAP2 368 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 ACTN1P12814 892 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 ANTXR2P58335 489 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 GDF6Q6KF10 455 aaPredicted RBP20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 DHX37Q8IY37 1157 aaKnown RBP20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 USP38Q8NB14 1042 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 PPTC7Q8NI37 304 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 IGDCC4Q8TDY8 1250 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 PCDHA11Q9Y5I1 949 aa20.29■□□□□ 0.84
CSNK1D-214ENST00000580565 PGM5Q15124 567 aa20.28■□□□□ 0.84
CSNK1D-214ENST00000580565 KCNV1Q6PIU1 500 aa20.28■□□□□ 0.84
CSNK1D-214ENST00000580565 MB21D2Q8IYB1 491 aaPredicted RBP20.28■□□□□ 0.84
CSNK1D-214ENST00000580565 CCDC155Q8N6L0 562 aa20.28■□□□□ 0.84
CSNK1D-214ENST00000580565 CTAGE1Q96RT6 745 aa20.28■□□□□ 0.84
CSNK1D-214ENST00000580565 FTOQ9C0B1 505 aaKnown RBP eCLIP20.28■□□□□ 0.84
CSNK1D-214ENST00000580565 RBM8AQ9Y5S9 174 aaKnown RBP20.28■□□□□ 0.84
CSNK1D-214ENST00000580565 SCN10AQ9Y5Y9 1956 aa20.27■□□□□ 0.84
CSNK1D-214ENST00000580565 MYOGP15173 224 aa20.27■□□□□ 0.84
CSNK1D-214ENST00000580565 PSEN2P49810 448 aa20.27■□□□□ 0.84
CSNK1D-214ENST00000580565 ADGRE1Q14246 886 aa20.27■□□□□ 0.84
CSNK1D-214ENST00000580565 MYSM1Q5VVJ2 828 aa20.27■□□□□ 0.84
CSNK1D-214ENST00000580565 FCHSD1Q86WN1 690 aa20.27■□□□□ 0.84
CSNK1D-214ENST00000580565 C7orf31Q8N865 590 aa20.27■□□□□ 0.84
CSNK1D-214ENST00000580565 IL31RAQ8NI17 732 aa20.27■□□□□ 0.84
CSNK1D-214ENST00000580565 CAGE1Q8TC20 777 aa20.27■□□□□ 0.84
CSNK1D-214ENST00000580565 PPFIA4O75335 1185 aa20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 TGFB3P10600 412 aa20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 CCND2P30279 289 aa20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 MFSD10Q14728 455 aa20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 CELF3Q5SZQ8 465 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 PPP2R2DQ66LE6 453 aa20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 AFAP1L1Q8TED9 768 aa20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 KATNAL1Q9BW62 490 aa20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 HDAC6Q9UBN7 1215 aa20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 GTF2IRD1Q9UHL9 959 aa20.26■□□□□ 0.83
CSNK1D-214ENST00000580565 HAS3O00219 553 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 F2P00734 622 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 ZNF286BP0CG31 522 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 HOXD8P13378 290 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 SP2Q02086 613 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 KIAA0753Q2KHM9 967 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 PHOSPHO2Q8TCD6 241 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 PIBF1Q8WXW3 757 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 PPM1EQ8WY54 764 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 DHX38Q92620 1227 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 ZFP91Q96JP5 570 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 SPATA33Q96N06 139 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 MAP3K14Q99558 947 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 ALG1Q9BT22 464 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 LY9Q9HBG7 655 aa20.25■□□□□ 0.83
CSNK1D-214ENST00000580565 SORBS3O60504 671 aa20.24■□□□□ 0.83
CSNK1D-214ENST00000580565 GGPS1O95749 300 aa20.24■□□□□ 0.83
CSNK1D-214ENST00000580565 SELPP16109 830 aa20.24■□□□□ 0.83
CSNK1D-214ENST00000580565 IGFBP4P22692 258 aa20.24■□□□□ 0.83
CSNK1D-214ENST00000580565 HSDL1Q3SXM5 330 aa20.24■□□□□ 0.83
CSNK1D-214ENST00000580565 SLC9A7Q96T83 725 aa20.24■□□□□ 0.83
CSNK1D-214ENST00000580565 VCANP13611 3396 aa20.23■□□□□ 0.83
CSNK1D-214ENST00000580565 PRC1O43663 620 aa20.23■□□□□ 0.83
CSNK1D-214ENST00000580565 DDAH1O94760 285 aa20.23■□□□□ 0.83
CSNK1D-214ENST00000580565 UBA1P22314 1058 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-214ENST00000580565 KIF5BP33176 963 aa20.23■□□□□ 0.83
CSNK1D-214ENST00000580565 RBL2Q08999 1139 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms