RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 INSL6Q9Y581 213 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 PARNO95453 639 aaKnown RBP13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 PPP2R5BQ15173 497 aa13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 SCFD2Q8WU76 684 aa13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 AFG1LQ8WV93 481 aa13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 MFSD14AQ96MC6 490 aa13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 ZDBF2Q9HCK1 2354 aa13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 HDAC6Q9UBN7 1215 aa13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
SUPT4H1-203ENST00000579289 NLRC5Q86WI3 1866 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 PATL2C9JE40 543 aaKnown RBP13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 GPAA1O43292 621 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 TXNP10599 105 aaKnown RBP13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 HOXD8P13378 290 aaPredicted RBP13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 SLC16A2P36021 539 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 RPS6P62753 249 aaKnown RBP13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 HYAL1Q12794 435 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 CAMK1Q14012 370 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 PLEKHG4Q58EX7 1191 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 KBTBD3Q8NAB2 608 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 DBF4BQ8NFT6 615 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 APPBP2Q92624 585 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 CACNA1AO00555 2505 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 ZFHX4Q86UP3 3567 aa13.25□□□□□ -0.29
SUPT4H1-203ENST00000579289 EFCAB14O75071 495 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 RAB11FIP3O75154 756 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 TBX10O75333 385 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 FGRP09769 529 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 HOXC8P31273 242 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 GTF2F1P35269 517 aaKnown RBP eCLIP13.24□□□□□ -0.293e-6■■■■□ 22.4
SUPT4H1-203ENST00000579289 PTK7Q13308 1070 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 GPM6BQ13491 265 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 IKBKEQ14164 716 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 LY6KQ17RY6 165 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 TIGD5Q53EQ6 642 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 TRIM67Q6ZTA4 783 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 RPAINQ86UA6 219 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 TBC1D5Q92609 795 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 TOP1MTQ969P6 601 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 MSLNLQ96KJ4 702 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 NSUN3Q9H649 340 aaKnown RBP13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 ZBTB40Q9NUA8 1239 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 COL20A1Q9P218 1284 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 CTNNA3Q9UI47 895 aa13.24□□□□□ -0.29
SUPT4H1-203ENST00000579289 RALGAPA2Q2PPJ7 1873 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 C5orf67F2Z3F1 127 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 F2P00734 622 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 PTPN5P54829 565 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 CBX2Q14781 532 aaPredicted RBP13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 FBXO11Q86XK2 927 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 TMEM192Q8IY95 271 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 DNERQ8NFT8 737 aa13.23□□□□□ -0.29
SUPT4H1-203ENST00000579289 KIAA1217Q5T5P2 1943 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 PTPDC1A2A3K4 754 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 TMEM221A6NGB7 291 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 LOC730098B7Z3J9 87 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 M0R296 226 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 LINC01565O15544 149 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 CALML3P27482 149 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 VCPP55072 806 aaKnown RBP13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 PPARAQ07869 468 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 SYDE2Q5VT97 1194 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 RNF207Q6ZRF8 634 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 EMID1Q96A84 441 aaPredicted RBP13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 SAMD11Q96NU1 681 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 CLDND1Q9NY35 253 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 DDX41Q9UJV9 622 aaKnown RBP13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 NOD1Q9Y239 953 aa13.22□□□□□ -0.29
SUPT4H1-203ENST00000579289 DMXL1Q9Y485 3027 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 RAD50Q92878 1312 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 WDR87Q6ZQQ6 2873 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 GRM6O15303 877 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 SMARCA5O60264 1052 aaPredicted RBP13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 EYA4O95677 639 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 SNHG28P0DPA3 235 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 PSEN2P49810 448 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 PDE4DQ08499 809 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 ADAM15Q13444 863 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 PTPROQ16827 1216 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 BRDTQ58F21 947 aaPredicted RBP13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 SERINC5Q86VE9 423 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 RGS22Q8NE09 1264 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 DCAF4Q8WV16 495 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 FAM86C1Q9NVL1 165 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 CLEC1BQ9P126 229 aa13.21□□□□□ -0.29
SUPT4H1-203ENST00000579289 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms