RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 FLT3LGP49771 235 aa15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 TOB1P50616 345 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 GHRHRQ02643 423 aa15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 UBE2SQ16763 222 aa15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 USP17L6PQ6QN14 398 aa15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 MOXD1Q6UVY6 613 aa15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 CTU1Q7Z7A3 348 aaKnown RBP15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 RAET1EQ8TD07 263 aa15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 SYTL5Q8TDW5 730 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 FERMT2Q96AC1 680 aa15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 ANO3Q9BYT9 981 aa15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 GJD2Q9UKL4 321 aa15.81■□□□□ 0.12
CSNK1D-209ENST00000578904 DOCK3Q8IZD9 2030 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 CCNT1O60563 726 aaKnown RBP15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 CUTAO60888 179 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 CNTN2Q02246 1040 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 ZNF174Q15697 407 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 LETM2Q2VYF4 491 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 ZNF792Q3KQV3 632 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 ARL6IP4Q66PJ3 421 aaKnown RBP15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 ADALQ6DHV7 355 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 FCHSD1Q86WN1 690 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 FAM133AQ8N9E0 248 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 KRI1Q8N9T8 703 aaKnown RBP15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 USP6NLQ92738 828 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 TMEM260Q9NX78 707 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 PCDHB6Q9Y5E3 794 aa15.8■□□□□ 0.12
CSNK1D-209ENST00000578904 LCTP09848 1927 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 B4DLN1 442 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 TRAK2O60296 914 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 HOXC6P09630 235 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 MCM7P33993 719 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 ZNF76P36508 570 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 IRF5Q13568 498 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 NBR1Q14596 966 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 PTPAQ15257 358 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 EARS2Q5JPH6 523 aaKnown RBP15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 PPP4R3AQ6IN85 833 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 NPLOC4Q8TAT6 608 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 PURBQ96QR8 312 aaKnown RBP15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 COL20A1Q9P218 1284 aa15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 ADD3Q9UEY8 706 aaKnown RBP15.79■□□□□ 0.12
CSNK1D-209ENST00000578904 ZNFX1Q9P2E3 1918 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 PLXNA1Q9UIW2 1896 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 A0A1W2PQ27 194 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 A0A1W2PQ64 194 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 A0A1W2PQD8 194 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 FAM205CA6NFA0 338 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 MARCH6O60337 910 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 NEMFO60524 1076 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 XRCC5P13010 732 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 SREBF1P36956 1147 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 ALDH5A1P51649 535 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 ATP2C1P98194 919 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 PTGDRQ13258 359 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 KLHL40Q2TBA0 621 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 CCDC73Q6ZRK6 1079 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 MAML3Q96JK9 1138 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 CHAMP1Q96JM3 812 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 FGD4Q96M96 766 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 MPHOSPH6Q99547 160 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 RAB34Q9BZG1 259 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 DIS3Q9Y2L1 958 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 SRPRBQ9Y5M8 271 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 PTCH2Q9Y6C5 1203 aa15.78■□□□□ 0.12
CSNK1D-209ENST00000578904 SOWAHBA6NEL2 793 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 CYP3A4P08684 503 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 EIF2AK2P19525 551 aaKnown RBP15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 PRPHP41219 470 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 ARHGAP4P98171 946 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 CCL14Q16627 93 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 TMEM266Q2M3C6 531 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 ARHGEF16Q5VV41 709 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 XRRA1Q6P2D8 792 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 ZNF467Q7Z7K2 595 aaPredicted RBP15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 TRMT44Q8IYL2 757 aaKnown RBP15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 DNERQ8NFT8 737 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 CCDC34Q96HJ3 373 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 TAAR1Q96RJ0 339 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 RMDN3Q96TC7 470 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 FTOQ9C0B1 505 aaKnown RBP eCLIP15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 PXMP2Q9NR77 195 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 FAM13BQ9NYF5 915 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 PCDHA7Q9UN72 937 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 PTPN22Q9Y2R2 807 aa15.77■□□□□ 0.12
CSNK1D-209ENST00000578904 ASTN1O14525 1302 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 ADCY3O60266 1144 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 ELNP15502 786 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 CMA1P23946 247 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 MARCKSP29966 332 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 TXLNAP40222 546 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 CALCRLQ16602 461 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 OLFML2BQ68BL8 750 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 DTHD1Q6ZMT9 781 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 SLAIN1Q8ND83 568 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 NSUN6Q8TEA1 469 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 TRIB2Q92519 343 aa15.76■□□□□ 0.11
CSNK1D-209ENST00000578904 MRPS27Q92552 414 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms