RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	CHST3	Q7LGC8	479 aa		5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	SESTD1	Q86VW0	696 aa		5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	MB21D2	Q8IYB1	491 aa	Predicted RBP	5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	DNER	Q8NFT8	737 aa		5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	OR6J1	Q8NGC5	347 aa		5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	EMID1	Q96A84	441 aa	Predicted RBP	5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	YTHDC1	Q96MU7	727 aa	Known RBP	5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	NECAB3	Q96P71	396 aa	Predicted RBP	5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	PDCD2L	Q9BRP1	358 aa		5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	C16orf70	Q9BSU1	422 aa		5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	PXMP2	Q9NR77	195 aa		5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TOMM22	Q9NS69	142 aa		5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	MROH7	Q68CQ1	1323 aa		5.22	□□□□□ -1.57
PPP4R1-209	ENST00000578329	KLRF2	D3W0D1	207 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329		E7EWF7	191 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MEIS2	O14770	477 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ZNF213	O14771	459 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SGSM2	O43147	1006 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	EDIL3	O43854	480 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SORBS3	O60504	671 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	F2	P00734	622 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	FGB	P02675	491 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CA3	P07451	260 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	NR3C2	P08235	984 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ZNF286B	P0CG31	522 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	BMP1	P13497	986 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	EIF2AK2	P19525	551 aa	Known RBP	5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	FUT2	Q10981	343 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ASPRV1	Q53RT3	343 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	GPATCH4	Q5T3I0	446 aa	Known RBP	5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MYSM1	Q5VVJ2	828 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	TYW1B	Q6NUM6	668 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	NFRKB	Q6P4R8	1299 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PSRC1	Q6PGN9	363 aa	Predicted RBP	5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SEPT14	Q6ZU15	432 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	NOL8	Q76FK4	1167 aa	Known RBP	5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	DEFB128	Q7Z7B8	93 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	VSIG10L	Q86VR7	867 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	TMEM199	Q8N511	208 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SCFD2	Q8WU76	684 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ESR2	Q92731	530 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MAP4K1	Q92918	833 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	VTI1A	Q96AJ9	217 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PIGS	Q96S52	555 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MTG1	Q9BT17	334 aa	Predicted RBP	5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MYL10	Q9BUA6	226 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LSG1	Q9H089	658 aa	Known RBP	5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	AP5M1	Q9H0R1	490 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RWDD1	Q9H446	243 aa	Predicted RBP	5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CERS4	Q9HA82	394 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	VAT1L	Q9HCJ6	419 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CD320	Q9NPF0	282 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	HDAC6	Q9UBN7	1215 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	GTF2IRD1	Q9UHL9	959 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ISY1	Q9ULR0	285 aa	Known RBP	5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PCDHA11	Q9Y5I1	949 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MTCH2	Q9Y6C9	303 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ABCB11	O95342	1321 aa		5.21	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MICAL3	Q7RTP6	2002 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PITPNM1	O00562	1244 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ATP9A	O75110	1047 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PLEKHA8P1	O95397	391 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CKB	P12277	381 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	UBA1	P22314	1058 aa	Known RBP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	KCNQ1	P51787	676 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	WDR5	P61964	334 aa	Known RBP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PDE4D	Q08499	809 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	AAMP	Q13685	434 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PGM5	Q15124	567 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PPP2R5B	Q15173	497 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CCDC85B	Q15834	202 aa	Predicted RBP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PPP4R3B	Q5MIZ7	849 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ZNF618	Q5T7W0	954 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	FBXO11	Q86XK2	927 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	TRIM50	Q86XT4	487 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	HERC6	Q8IVU3	1022 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CMTR1	Q8N1G2	835 aa	Known RBP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CRIPAK	Q8N1N5	446 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SRBD1	Q8N5C6	995 aa	Known RBP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ZBTB10	Q96DT7	871 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	INPP4A	Q96PE3	977 aa	Predicted RBP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ASB2	Q96Q27	587 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RMDN3	Q96TC7	470 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LY9	Q9HBG7	655 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SPC25	Q9HBM1	224 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	C11orf16	Q9NQ32	467 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	FAM217B	Q9NTX9	383 aa	Predicted RBP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	POLR3E	Q9NVU0	708 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ADD3	Q9UEY8	706 aa	Known RBP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	TRIO	O75962	3097 aa		5.2	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	hCG_1642624	A0A1W2PR95	340 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SPATA31C2	B4DYI2	1134 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ZBTB5	O15062	677 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	NKRF	O15226	690 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	TLR3	O15455	904 aa	Known RBP	5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms