RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 ZNF700Q9H0M5 742 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 TRIT1Q9H3H1 467 aaKnown RBP6.14□□□□□ -1.43
KRT39-202ENST00000578029 KCNF1Q9H3M0 494 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 IPPKQ9H8X2 491 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 PNMA8BQ9ULN7 279 aaPredicted RBP6.14□□□□□ -1.43
KRT39-202ENST00000578029 ANKRD6Q9Y2G4 727 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 CAPN6Q9Y6Q1 641 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 GNAT3A8MTJ3 354 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 PRPF3O43395 683 aaKnown RBP6.13□□□□□ -1.43
KRT39-202ENST00000578029 ZNF205O95201 554 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 CFBP00751 764 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 SRFP11831 508 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 GRK2P25098 689 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 GRK3P35626 688 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 IARSP41252 1262 aaKnown RBP6.13□□□□□ -1.43
KRT39-202ENST00000578029 RECQLP46063 649 aaPredicted RBP6.13□□□□□ -1.43
KRT39-202ENST00000578029 CRY1Q16526 586 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 SYCP2LQ5T4T6 812 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 OGFOD3Q6PK18 319 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 EFHBQ8N7U6 833 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 ZNF526Q8TF50 670 aaPredicted RBP6.13□□□□□ -1.43
KRT39-202ENST00000578029 MPHOSPH6Q99547 160 aaKnown RBP6.13□□□□□ -1.43
KRT39-202ENST00000578029 ZNF652Q9Y2D9 606 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 PCDHA2Q9Y5H9 948 aa6.13□□□□□ -1.43
KRT39-202ENST00000578029 PRR33A8MZF0 331 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 FAM155AB1AL88 458 aaPredicted RBP6.12□□□□□ -1.43
KRT39-202ENST00000578029 MT-CO1P00395 513 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 ENDOUP21128 410 aaKnown RBP6.12□□□□□ -1.43
KRT39-202ENST00000578029 GRIK1P39086 918 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 GTF2A2P52657 109 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 PCBP3P57721 371 aaKnown RBP6.12□□□□□ -1.43
KRT39-202ENST00000578029 KRT85P78386 507 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 TCIRG1Q13488 830 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 DDB1Q16531 1140 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 INF2Q27J81 1249 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 MINDY4Q4G0A6 757 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 CYP27C1Q4G0S4 372 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 TMEM240Q5SV17 173 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 BEND4Q6ZU67 534 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 PODNQ7Z5L7 613 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 PNMA8AQ86V59 439 aaPredicted RBP6.12□□□□□ -1.43
KRT39-202ENST00000578029 ARMC10Q8N2F6 343 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 CPA6Q8N4T0 437 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 CLRN3Q8NCR9 226 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 LINC00116Q8NCU8 138 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 RB1CC1Q8TDY2 1594 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 FBXO41Q8TF61 875 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 FAXDC2Q96IV6 333 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 CHAMP1Q96JM3 812 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 HEXIM2Q96MH2 286 aaKnown RBP6.12□□□□□ -1.43
KRT39-202ENST00000578029 DUSP15Q9H1R2 295 aaPredicted RBP6.12□□□□□ -1.43
KRT39-202ENST00000578029 VTA1Q9NP79 307 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 PRDM11Q9NQV5 511 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 CATSPERZQ9NTU4 200 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 OXSMQ9NWU1 459 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 GIT1Q9Y2X7 761 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 MRFAP1Q9Y605 127 aa6.12□□□□□ -1.43
KRT39-202ENST00000578029 H7C1D1 291 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 FGF10O15520 208 aaPredicted RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 DHX15O43143 795 aaKnown RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 ARHGEF15O94989 841 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 SYPP08247 313 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 PF4V1P10720 104 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 VCAM1P19320 739 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 TPP2P29144 1249 aaPredicted RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 CYP2C19P33261 490 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 LACTBP83111 547 aaPredicted RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 INSM1Q01101 510 aaPredicted RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 LSAMPQ13449 338 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 RTP2Q5QGT7 225 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 BROXQ5VW32 411 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 PGM2L1Q6PCE3 622 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 OTOP1Q7RTM1 612 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 TSPYL5Q86VY4 417 aaPredicted RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 CLEC10AQ8IUN9 316 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 TPH2Q8IWU9 490 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 DZIP1LQ8IYY4 767 aaKnown RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 CISD2Q8N5K1 135 aaKnown RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 USHBP1Q8N6Y0 703 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 C1orf162Q8NEQ5 155 aaPredicted RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 PTCHD1Q96NR3 888 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 C14orf119Q9NWQ9 140 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 MKS1Q9NXB0 559 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 OBP2AQ9NY56 170 aa6.11□□□□□ -1.43
KRT39-202ENST00000578029 TIMM13Q9Y5L4 95 aaPredicted RBP6.11□□□□□ -1.43
KRT39-202ENST00000578029 VSTM5A8MXK1 200 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 RBAK-RBAKDNI3L0D1 243 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 TBC1D8O95759 1140 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 RBP3P10745 1247 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 PURAQ00577 322 aaKnown RBP6.1□□□□□ -1.43
KRT39-202ENST00000578029 GTF2H3Q13889 308 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 SAFB2Q14151 953 aaKnown RBP eCLIP6.1□□□□□ -1.43
KRT39-202ENST00000578029 ADGRE1Q14246 886 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 PCBP2Q15366 365 aaKnown RBP eCLIP6.1□□□□□ -1.43
KRT39-202ENST00000578029 ZNF174Q15697 407 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 VPS72Q15906 364 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 LONRF3Q496Y0 759 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 CREB3L3Q68CJ9 461 aa6.1□□□□□ -1.43
KRT39-202ENST00000578029 TSHZ1Q6ZSZ6 1077 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms