RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 PCDHA1Q9Y5I3 950 aa19.34■□□□□ 0.69
CDK5RAP3-206ENST00000578018 PITPNM1O00562 1244 aa19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 EIF3JO75822 258 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 HOMER1Q86YM7 354 aa19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 NCOA7Q8NI08 942 aa19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 EMID1Q96A84 441 aaPredicted RBP19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 RIOX1Q9H6W3 641 aa19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 MAP3K20Q9NYL2 800 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 MSRAQ9UJ68 235 aa19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 DDX41Q9UJV9 622 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 SPTBN5Q9NRC6 3674 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-206ENST00000578018 ERICH2A1L162 156 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 CYTH3O43739 400 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 HOXA13P31271 388 aaPredicted RBP19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 ANTXR2P58335 489 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 TROAPQ12815 778 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 WTAPQ15007 396 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 SART3Q15020 963 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 CHST3Q7LGC8 479 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 DEFB128Q7Z7B8 93 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 SESTD1Q86VW0 696 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 KAT2BQ92831 832 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PIGSQ96S52 555 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PDCD2LQ9BRP1 358 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 YBX2Q9Y2T7 364 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 MRVI1Q9Y6F6 885 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 SLC4A7Q9Y6M7 1214 aa19.32■□□□□ 0.68
CDK5RAP3-206ENST00000578018 ZBBXA8MT70 800 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 RGS20O76081 388 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 RFC2P35250 354 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 CHMP4BP1P59074 171 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 MB21D2Q8IYB1 491 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 SAMD3Q8N6K7 520 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 USP38Q8NB14 1042 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 MAP4K1Q92918 833 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 CTAGE1Q96RT6 745 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 NKX2-4Q9H2Z4 354 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PRDM12Q9H4Q4 367 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 NOD1Q9Y239 953 aa19.31■□□□□ 0.68
CDK5RAP3-206ENST00000578018 IQCF3P0C7M6 154 aa19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 CASTP20810 708 aaKnown RBP19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 RABGGTBP53611 331 aa19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 TRAF1Q13077 416 aa19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 BFSP2Q13515 415 aa19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PGM5Q15124 567 aa19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 DGKDQ16760 1214 aa19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 TMEM67Q5HYA8 995 aa19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 IL31RAQ8NI17 732 aa19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PPTC7Q8NI37 304 aa19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 GAS2L1Q99501 681 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 RBM8AQ9Y5S9 174 aaKnown RBP19.3■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PNMA6FA0A0J9YX94 578 aa19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 MYCLP12524 364 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 ATP2A2P16615 1042 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 LAMC2Q13753 1193 aa19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PTGISQ16647 500 aa19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 GDF6Q6KF10 455 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 RETREG2Q8NC44 543 aa19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 IGDCC4Q8TDY8 1250 aa19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 SLC28A3Q9HAS3 691 aa19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PCDHA11Q9Y5I1 949 aa19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PTPRSQ13332 1948 aa19.29■□□□□ 0.68
CDK5RAP3-206ENST00000578018 F2P00734 622 aa19.28■□□□□ 0.68
CDK5RAP3-206ENST00000578018 ZNF286BP0CG31 522 aa19.28■□□□□ 0.68
CDK5RAP3-206ENST00000578018 HOXD8P13378 290 aaPredicted RBP19.28■□□□□ 0.68
CDK5RAP3-206ENST00000578018 CATIPQ7Z7H3 387 aa19.28■□□□□ 0.68
CDK5RAP3-206ENST00000578018 VSIG10LQ86VR7 867 aa19.28■□□□□ 0.68
CDK5RAP3-206ENST00000578018 CAGE1Q8TC20 777 aa19.28■□□□□ 0.68
CDK5RAP3-206ENST00000578018 GTF2IRD1Q9UHL9 959 aa19.28■□□□□ 0.68
CDK5RAP3-206ENST00000578018 TRANK1O15050 2925 aa19.28■□□□□ 0.68
CDK5RAP3-206ENST00000578018 GCOM1H8Y6P7 765 aaPredicted RBP19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 POLR2MP0CAP2 368 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 ACTN1P12814 892 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 MYOGP15173 224 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 PSEN2P49810 448 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 ADGRE1Q14246 886 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 MYSM1Q5VVJ2 828 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 KCNV1Q6PIU1 500 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 DHX37Q8IY37 1157 aaKnown RBP19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 CCDC155Q8N6L0 562 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 AFAP1L1Q8TED9 768 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 DHX38Q92620 1227 aaKnown RBP19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 KATNAL1Q9BW62 490 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 LY9Q9HBG7 655 aa19.27■□□□□ 0.68
CDK5RAP3-206ENST00000578018 FRMPD4Q14CM0 1322 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 HAS3O00219 553 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 DDAH1O94760 285 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 UBA1P22314 1058 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 CCND2P30279 289 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 RBL2Q08999 1139 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 MFSD10Q14728 455 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 CELF3Q5SZQ8 465 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PPP2R2DQ66LE6 453 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 FCHSD1Q86WN1 690 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 ZNF654Q8IZM8 581 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 MAP3K14Q99558 947 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 LSG1Q9H089 658 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 HDAC6Q9UBN7 1215 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 NCOR1O75376 2440 aa19.26■□□□□ 0.67
CDK5RAP3-206ENST00000578018 DOCK5Q9H7D0 1870 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms