RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 TAF6LQ9Y6J9 622 aa17.34■□□□□ 0.37
RN7SL560P-201ENST00000577943 ZBBXA8MT70 800 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 PFKMP08237 780 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 MYCLP12524 364 aaPredicted RBP17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 HOXA13P31271 388 aaPredicted RBP17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 GHRHRQ02643 423 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 ARHGAP1Q07960 439 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 RAB30Q15771 203 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 TMEM67Q5HYA8 995 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 STOX1Q6ZVD7 989 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 DEFB128Q7Z7B8 93 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 RETREG2Q8NC44 543 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 MAP4K1Q92918 833 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 PIGSQ96S52 555 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 RIOX1Q9H6W3 641 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 DDX41Q9UJV9 622 aaKnown RBP17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 RBM8AQ9Y5S9 174 aaKnown RBP17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 MRVI1Q9Y6F6 885 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 DOCK5Q9H7D0 1870 aa17.33■□□□□ 0.36
RN7SL560P-201ENST00000577943 KAT6AQ92794 2004 aa17.32■□□□□ 0.36
RN7SL560P-201ENST00000577943 TROAPQ12815 778 aa17.32■□□□□ 0.36
RN7SL560P-201ENST00000577943 DGKDQ16760 1214 aa17.32■□□□□ 0.36
RN7SL560P-201ENST00000577943 CATIPQ7Z7H3 387 aa17.32■□□□□ 0.36
RN7SL560P-201ENST00000577943 PDCD2LQ9BRP1 358 aa17.32■□□□□ 0.36
RN7SL560P-201ENST00000577943 SLC4A7Q9Y6M7 1214 aa17.32■□□□□ 0.36
RN7SL560P-201ENST00000577943 PNMA6FA0A0J9YX94 578 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 GCOM1H8Y6P7 765 aaPredicted RBP17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 CYTH3O43739 400 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 POLR2MP0CAP2 368 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 ANTXR2P58335 489 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 BFSP2Q13515 415 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 PGM5Q15124 567 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 SLC35G1Q2M3R5 365 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 DHX37Q8IY37 1157 aaKnown RBP17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 MB21D2Q8IYB1 491 aaPredicted RBP17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 IGDCC4Q8TDY8 1250 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 GAS2L1Q99501 681 aaPredicted RBP17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 NKX2-4Q9H2Z4 354 aa17.31■□□□□ 0.36
RN7SL560P-201ENST00000577943 ACTN1P12814 892 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 LAMC2Q13753 1193 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 PTGISQ16647 500 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 KCNV1Q6PIU1 500 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 FCHSD1Q86WN1 690 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 PIBF1Q8WXW3 757 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 EMID1Q96A84 441 aaPredicted RBP17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 VWCEQ96DN2 955 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 PRDM12Q9H4Q4 367 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 SLC28A3Q9HAS3 691 aa17.3■□□□□ 0.36
RN7SL560P-201ENST00000577943 IQCF3P0C7M6 154 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 CCND2P30279 289 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 RFC2P35250 354 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 RABGGTBP53611 331 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 GDF6Q6KF10 455 aaPredicted RBP17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 VSIG10LQ86VR7 867 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 SESTD1Q86VW0 696 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 CCDC155Q8N6L0 562 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 PPTC7Q8NI37 304 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 CTCFLQ8NI51 663 aaPredicted RBP17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 KAT2BQ92831 832 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 ALG1Q9BT22 464 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 KATNAL1Q9BW62 490 aa17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 FTOQ9C0B1 505 aaKnown RBP eCLIP17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 YBX2Q9Y2T7 364 aaKnown RBP17.29■□□□□ 0.36
RN7SL560P-201ENST00000577943 SORBS3O60504 671 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 RGS20O76081 388 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 ATP2A2P16615 1042 aaKnown RBP17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 ZNF654Q8IZM8 581 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 C7orf31Q8N865 590 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 CAGE1Q8TC20 777 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 MYL10Q9BUA6 226 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 COL25A1Q9BXS0 654 aaPredicted RBP17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 LY9Q9HBG7 655 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 HDAC6Q9UBN7 1215 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 CUL9Q8IWT3 2517 aa17.28■□□□□ 0.36
RN7SL560P-201ENST00000577943 PTPRSQ13332 1948 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 VCANP13611 3396 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 PRC1O43663 620 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 DDAH1O94760 285 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 GGPS1O95749 300 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 ZNF286BP0CG31 522 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 KIF5BP33176 963 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 PSEN2P49810 448 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 MFSD10Q14728 455 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 NFXL1Q6ZNB6 911 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 RRP36Q96EU6 259 aaKnown RBP17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 SPATA33Q96N06 139 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 MAP3K14Q99558 947 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 LSG1Q9H089 658 aaKnown RBP17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 GTF2IRD1Q9UHL9 959 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 PCDHA11Q9Y5I1 949 aa17.27■□□□□ 0.36
RN7SL560P-201ENST00000577943 CCDC69A6NI79 296 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 TGFB3P10600 412 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 MYOGP15173 224 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms