RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 PIK3AP1Q6ZUJ8 805 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 FBXO11Q86XK2 927 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 DAGLBQ8NCG7 672 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 CHURC1Q8WUH1 139 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 LPAR1Q92633 364 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 PGBD1Q96JS3 809 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 SPATA32Q96LK8 384 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 SLF1Q9BQI6 1058 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 KCNH6Q9H252 994 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 TMOD4Q9NZQ9 345 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 PCDHA6Q9UN73 950 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 PCDHA8Q9Y5H6 950 aa11.5□□□□□ -0.57
CRLF3-202ENST00000577725 C19orf81C9J6K1 198 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 PI4K2BG5E9Z4 385 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 STK38Q15208 465 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 TREML2Q5T2D2 321 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 ANO1Q5XXA6 986 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 TMEM87AQ8NBN3 555 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 CCDC12Q8WUD4 166 aaPredicted RBP11.49□□□□□ -0.57
CRLF3-202ENST00000577725 KHSRPQ92945 711 aaKnown RBP eCLIP11.49□□□□□ -0.57
CRLF3-202ENST00000577725 ATG4CQ96DT6 458 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 C12orf42Q96LP6 360 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 ZMYND12Q9H0C1 365 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 RANBP17Q9H2T7 1088 aaKnown RBP11.49□□□□□ -0.57
CRLF3-202ENST00000577725 C6orf50Q9HD87 102 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 AGTPBP1Q9UPW5 1226 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 PCDHA1Q9Y5I3 950 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 LOC285556D6RIA3 1793 aa11.49□□□□□ -0.57
CRLF3-202ENST00000577725 RLFQ13129 1914 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 hCG_1984214I3L0E3 225 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 M0R2N6 131 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 DNM1LO00429 736 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 TRAK2O60296 914 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 PLA2G6O60733 806 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 GCLCP48506 637 aaPredicted RBP11.48□□□□□ -0.57
CRLF3-202ENST00000577725 SF3A1Q15459 793 aaKnown RBP11.48□□□□□ -0.57
CRLF3-202ENST00000577725 PPP1R18Q6NYC8 613 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 ZNF713Q8N859 430 aaPredicted RBP11.48□□□□□ -0.57
CRLF3-202ENST00000577725 GPT2Q8TD30 523 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 NUDT12Q9BQG2 462 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 AMNQ9BXJ7 453 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 PDLIM7Q9NR12 457 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 RTEL1Q9NZ71 1219 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 CFAP45Q9UL16 551 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 PPP1R9AQ9ULJ8 1098 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 PCDHB6Q9Y5E3 794 aa11.48□□□□□ -0.57
CRLF3-202ENST00000577725 COL11A1P12107 1806 aaPredicted RBP11.48□□□□□ -0.57
CRLF3-202ENST00000577725 CCDC194A0A1B0GVG4 234 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 ESYT2A0FGR8 921 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 TRIM43BA6NCK2 446 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L15C9J2P7 530 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L13C9JLJ4 530 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L11C9JVI0 530 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L18D6R9N7 530 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L22D6RA61 530 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L17D6RBQ6 530 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L19D6RCP7 530 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L20D6RJB6 530 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 MARCKSP29966 332 aaPredicted RBP11.47□□□□□ -0.57
CRLF3-202ENST00000577725 EPHB4P54760 987 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L24Q0WX57 530 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 ZNF174Q15697 407 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 INF2Q27J81 1249 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 SH3D19Q5HYK7 790 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 USP17L6PQ6QN14 398 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 SLC39A5Q6ZMH5 540 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 CPXCR1Q8N123 301 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 LINC00301Q8NCQ3 95 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 TRIM43Q96BQ3 446 aaPredicted RBP11.47□□□□□ -0.57
CRLF3-202ENST00000577725 FBXL18Q96ME1 805 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 SCAND2PQ9GZW5 306 aaPredicted RBP11.47□□□□□ -0.57
CRLF3-202ENST00000577725 RAVER2Q9HCJ3 691 aaKnown RBP11.47□□□□□ -0.57
CRLF3-202ENST00000577725 RIC8AQ9NPQ8 531 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 RCOR1Q9UKL0 485 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 MRVI1Q9Y6F6 885 aa11.47□□□□□ -0.57
CRLF3-202ENST00000577725 ZNF536O15090 1300 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 OPLAHO14841 1288 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 MSCO60682 206 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 PEX10O60683 326 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 GNA11P29992 359 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 DSG3P32926 999 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 NASPP49321 788 aaPredicted RBP11.46□□□□□ -0.57
CRLF3-202ENST00000577725 PTPAQ15257 358 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 CSPP1Q1MSJ5 1256 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 TRIM60Q495X7 471 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 TTC38Q5R3I4 469 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 ATL3Q6DD88 541 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 GALNT17Q6IS24 598 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 CATSPERGQ6ZRH7 1159 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 KRT25Q7Z3Z0 450 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 HS6ST3Q8IZP7 471 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 REXO1Q8N1G1 1221 aaKnown RBP11.46□□□□□ -0.57
CRLF3-202ENST00000577725 PRPF38AQ8NAV1 312 aaKnown RBP11.46□□□□□ -0.57
CRLF3-202ENST00000577725 TBC1D5Q92609 795 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 CUL5Q93034 780 aa11.46□□□□□ -0.57
CRLF3-202ENST00000577725 UIMC1Q96RL1 719 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms