RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	TIMP1	P01033	207 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	GH1	P01241	217 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	CENPB	P07199	599 aa	Predicted RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	NR3C2	P08235	984 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	HMGB1	P09429	215 aa	Known RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	CAST	P20810	708 aa	Known RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	CCND2	P30279	289 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	GNPTAB	Q3T906	1256 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	ZNF697	Q5TEC3	545 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	CREB3L3	Q68CJ9	461 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	GPR153	Q6NV75	609 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	KCNV1	Q6PIU1	500 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	SH3RF1	Q7Z6J0	888 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	FCHSD1	Q86WN1	690 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	DHX37	Q8IY37	1157 aa	Known RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	MB21D2	Q8IYB1	491 aa	Predicted RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	ZNF654	Q8IZM8	581 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	DEFB123	Q8N688	67 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	RETREG2	Q8NC44	543 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	TRIM43	Q96BQ3	446 aa	Predicted RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	LRCH3	Q96II8	777 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	RNPC3	Q96LT9	517 aa	Known RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	NEK1	Q96PY6	1258 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PIGS	Q96S52	555 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	MAP3K14	Q99558	947 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	MTG1	Q9BT17	334 aa	Predicted RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PPP1R12C	Q9BZL4	782 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	KATNBL1	Q9H079	304 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	LSG1	Q9H089	658 aa	Known RBP	6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PRO3102	Q9H379	93 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	EHMT1	Q9H9B1	1298 aa		6.26	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	COL11A1	P12107	1806 aa	Predicted RBP	6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	RBM47	A0AV96	593 aa	Known RBP	6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	SH2B2	O14492	632 aa	Predicted RBP	6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	ADCY6	O43306	1168 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	EDNRB	P24530	442 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	SMARCA1	P28370	1054 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	HOXA13	P31271	388 aa	Predicted RBP	6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	LIFR	P42702	1097 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	NKX3-2	P78367	333 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	FAAP100	Q0VG06	881 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	TROAP	Q12815	778 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	LAMC2	Q13753	1193 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	SHH	Q15465	462 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	DGKD	Q16760	1214 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	CCSAP	Q6IQ19	270 aa	Predicted RBP	6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	MFSD5	Q6N075	450 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PSRC1	Q6PGN9	363 aa	Predicted RBP	6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	STOX1	Q6ZVD7	989 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	RPUSD2	Q8IZ73	545 aa	Known RBP	6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	CCDC155	Q8N6L0	562 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	IGDCC4	Q8TDY8	1250 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	TBC1D5	Q92609	795 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	MYL10	Q9BUA6	226 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	KATNAL1	Q9BW62	490 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	HIPK3	Q9H422	1215 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	RIOX1	Q9H6W3	641 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	MLXIP	Q9HAP2	919 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	LY9	Q9HBG7	655 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PXMP2	Q9NR77	195 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	RBM28	Q9NW13	759 aa	Known RBP	6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	GTF3C3	Q9Y5Q9	886 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	DDX49	Q9Y6V7	483 aa	Known RBP	6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	ASTN1	O14525	1302 aa		6.25	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	CCDC196	A0A1B0GTZ2	297 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	SPDYE3	A6NKU9	549 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	TULP1	O00294	542 aa	Predicted RBP	6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	NOP56	O00567	594 aa	Known RBP	6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	ZBTB43	O43298	467 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	STAM2	O75886	525 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	ACTN1	P12814	892 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PSMA5	P28066	241 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	CDK7	P50613	346 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	HSD17B4	P51659	736 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	ANTXR2	P58335	489 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PSMC6	P62333	389 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PURA	Q00577	322 aa	Known RBP	6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	AKAP17A	Q02040	695 aa	Known RBP	6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PTPN11	Q06124	597 aa	Predicted RBP	6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	BFSP2	Q13515	415 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	NECTIN1	Q15223	517 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	LY6K	Q17RY6	165 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	DHX32	Q7L7V1	743 aa	Known RBP	6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	NLRX1	Q86UT6	975 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	MICU3	Q86XE3	530 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	FAM126B	Q8IXS8	530 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	CCDC82	Q8N4S0	544 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	C7orf31	Q8N865	590 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	AFG1L	Q8WV93	481 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	COPS5	Q92905	334 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	MTMR8	Q96EF0	704 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PDCD2L	Q9BRP1	358 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	SPZ1	Q9BXG8	430 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	LRRC2	Q9BYS8	371 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524	PARP14	Q460N5	1801 aa		6.24	□□□□□ -1.41
ARHGAP28-208	ENST00000577524		A6NJR5	290 aa		6.23	□□□□□ -1.41

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