RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 ANKS1AQ92625 1134 aa13.79□□□□□ -0.2
CDH8-202ENST00000577228 KAT2BQ92831 832 aa13.79□□□□□ -0.2
CDH8-202ENST00000577228 NECAB3Q96P71 396 aaPredicted RBP13.79□□□□□ -0.2
CDH8-202ENST00000577228 CTAGE1Q96RT6 745 aa13.79□□□□□ -0.2
CDH8-202ENST00000577228 ZSCAN10Q96SZ4 725 aaPredicted RBP13.79□□□□□ -0.2
CDH8-202ENST00000577228 DIAPH3Q9NSV4 1193 aa13.79□□□□□ -0.2
CDH8-202ENST00000577228 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
CDH8-202ENST00000577228 LAMA4Q16363 1823 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 TLL1O43897 1013 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 PARP1P09874 1014 aaKnown RBP13.78□□□□□ -0.2
CDH8-202ENST00000577228 EIF2AK2P19525 551 aaKnown RBP13.78□□□□□ -0.2
CDH8-202ENST00000577228 KCNQ1P51787 676 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 WDR5P61964 334 aaKnown RBP13.78□□□□□ -0.2
CDH8-202ENST00000577228 DGKDQ16760 1214 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 ARHGEF16Q5VV41 709 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 KRT40Q6A162 431 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 CWC27Q6UX04 472 aaKnown RBP13.78□□□□□ -0.2
CDH8-202ENST00000577228 LRRC8DQ7L1W4 858 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 ENAHQ8N8S7 591 aaPredicted RBP13.78□□□□□ -0.2
CDH8-202ENST00000577228 DHX38Q92620 1227 aaKnown RBP13.78□□□□□ -0.2
CDH8-202ENST00000577228 VAT1LQ9HCJ6 419 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 TET1Q8NFU7 2136 aa13.78□□□□□ -0.2
CDH8-202ENST00000577228 EIF3JO75822 258 aaKnown RBP13.77□□□□□ -0.21
CDH8-202ENST00000577228 PARNO95453 639 aaKnown RBP13.77□□□□□ -0.21
CDH8-202ENST00000577228 PSEN2P49810 448 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 RBL2Q08999 1139 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 GRB10Q13322 594 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 CNKSR3Q6P9H4 555 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 SMC5Q8IY18 1101 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 C7orf31Q8N865 590 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 ALG1Q9BT22 464 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 ZBED2Q9BTP6 218 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 KATNAL1Q9BW62 490 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 JMJD4Q9H9V9 463 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 ZSWIM5Q9P217 1185 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 HDAC6Q9UBN7 1215 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 GTF2IRD1Q9UHL9 959 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 DDX41Q9UJV9 622 aaKnown RBP13.77□□□□□ -0.21
CDH8-202ENST00000577228 COG5Q9UP83 839 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 MRVI1Q9Y6F6 885 aa13.77□□□□□ -0.21
CDH8-202ENST00000577228 HIP1O00291 1037 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 CFBP00751 764 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 NR3C2P08235 984 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 ZNF286BP0CG31 522 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 AAMPQ13685 434 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 LAMC2Q13753 1193 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 MFSD10Q14728 455 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 GPNMBQ14956 572 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 IMMTQ16891 758 aaKnown RBP13.76□□□□□ -0.21
CDH8-202ENST00000577228 CHD1LQ86WJ1 897 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 PPTC7Q8NI37 304 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 EMID1Q96A84 441 aaPredicted RBP13.76□□□□□ -0.21
CDH8-202ENST00000577228 UBAC1Q9BSL1 405 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 DSCC1Q9BVC3 393 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 AMNQ9BXJ7 453 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 KRT23Q9C075 422 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 RWDD1Q9H446 243 aaPredicted RBP13.76□□□□□ -0.21
CDH8-202ENST00000577228 OSBPL3Q9H4L5 887 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 PXMP2Q9NR77 195 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 RAPGEFL1Q9UHV5 662 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 CTNNA3Q9UI47 895 aa13.76□□□□□ -0.21
CDH8-202ENST00000577228 TRIP12Q14669 1992 aaPredicted RBP13.76□□□□□ -0.21
CDH8-202ENST00000577228 TCF20Q9UGU0 1960 aaKnown RBP13.76□□□□□ -0.21
CDH8-202ENST00000577228 BDP1A6H8Y1 2624 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 KIAA1217Q5T5P2 1943 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 LCHNA4D1U4 455 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 NBNO60934 754 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 F2P00734 622 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 CXCL10P02778 98 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 CKBP12277 381 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 HSD17B4P51659 736 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 DEFB103AP81534 67 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 PTK7Q13308 1070 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 KIAA0753Q2KHM9 967 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 SPRED2Q7Z698 418 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 TMCO2Q7Z6W1 182 aaPredicted RBP13.75□□□□□ -0.21
CDH8-202ENST00000577228 DHX37Q8IY37 1157 aaKnown RBP13.75□□□□□ -0.21
CDH8-202ENST00000577228 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
CDH8-202ENST00000577228 MUC3AQ02505 3323 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 ABHD14A-ACY1A0A1B0GW23 586 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 HAS3O00219 553 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 OPLAHO14841 1288 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 LPXNO60711 386 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 EFCAB14O75071 495 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 MYCLP12524 364 aaPredicted RBP13.74□□□□□ -0.21
CDH8-202ENST00000577228 NUCB1Q02818 461 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 IFIT1BQ5T764 474 aaKnown RBP13.74□□□□□ -0.21
CDH8-202ENST00000577228 STAG2Q8N3U4 1231 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 GDPD5Q8WTR4 605 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 HLA-CQ95604 372 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 PDCD2LQ9BRP1 358 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 C1QTNF1Q9BXJ1 281 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 COL4A4P53420 1690 aaPredicted RBP13.74□□□□□ -0.21
CDH8-202ENST00000577228 MYH6P13533 1939 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 PTPRSQ13332 1948 aa13.74□□□□□ -0.21
CDH8-202ENST00000577228 KLRF2D3W0D1 207 aa13.73□□□□□ -0.21
CDH8-202ENST00000577228 SORBS3O60504 671 aa13.73□□□□□ -0.21
CDH8-202ENST00000577228 GJB5O95377 273 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms