RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 GSTCDQ8NEC7 633 aa5.05□□□□□ -1.6
CDC27-218ENST00000575830 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.05□□□□□ -1.6
CDC27-218ENST00000575830 MZB1Q8WU39 189 aa5.05□□□□□ -1.6
CDC27-218ENST00000575830 SLC38A3Q99624 504 aa5.05□□□□□ -1.6
CDC27-218ENST00000575830 RNF38Q9H0F5 515 aa5.05□□□□□ -1.6
CDC27-218ENST00000575830 PIF1Q9H611 641 aa5.05□□□□□ -1.6
CDC27-218ENST00000575830 MARCH2Q9P0N8 246 aa5.05□□□□□ -1.6
CDC27-218ENST00000575830 PLA2G2DQ9UNK4 145 aa5.05□□□□□ -1.6
CDC27-218ENST00000575830 SMG5Q9UPR3 1016 aaKnown RBP5.05□□□□□ -1.6
CDC27-218ENST00000575830 MRPS23Q9Y3D9 190 aaKnown RBP5.05□□□□□ -1.6
CDC27-218ENST00000575830 DBX1A6NMT0 343 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 BTBD11A6QL63 1104 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 F8W031 263 aaPredicted RBP5.04□□□□□ -1.6
CDC27-218ENST00000575830 SGSM2O43147 1006 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 TMEM253P0C7T8 217 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 YBX3P16989 372 aaKnown RBP eCLIP5.04□□□□□ -1.6
CDC27-218ENST00000575830 EPHB3P54753 998 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 ZNF124Q15973 351 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 ATG14Q6ZNE5 492 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 USP53Q70EK8 1073 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 CEP68Q76N32 757 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 DPH6Q7L8W6 267 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 TMC6Q7Z403 805 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 AMIGO3Q86WK7 504 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 MIB1Q86YT6 1006 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 TEX2Q8IWB9 1127 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 SEC14L1Q92503 715 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 PTPRN2Q92932 1015 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 PHF20Q9BVI0 1012 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 SGPP1Q9BX95 441 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 PCDHA2Q9Y5H9 948 aa5.04□□□□□ -1.6
CDC27-218ENST00000575830 BLACEA4D250 179 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 CCDC85CA6NKD9 419 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 MYO1BO43795 1136 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 ASGR2P07307 311 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 ATF2P15336 505 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 FPR2P25090 351 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 RAP1GAPP47736 663 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 GABREP78334 506 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 SQSTM1Q13501 440 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 CYP4F22Q6NT55 531 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 CABP7Q86V35 215 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 DCP2Q8IU60 420 aaKnown RBP5.03□□□□□ -1.6
CDC27-218ENST00000575830 IFNL3Q8IZI9 196 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 ZSWIM2Q8NEG5 633 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.03□□□□□ -1.6
CDC27-218ENST00000575830 TMEM169Q96HH4 297 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 SIRT5Q9NXA8 310 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 HSPBP1Q9NZL4 362 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 NUDT5Q9UKK9 219 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 ZNF652Q9Y2D9 606 aa5.03□□□□□ -1.6
CDC27-218ENST00000575830 A0A1W2PQJ5 194 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 ARVCFO00192 962 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 NFIBO00712 420 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 JAG1P78504 1218 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 HTRA3P83110 453 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 BMS1Q14692 1282 aaKnown RBP5.02□□□□□ -1.61
CDC27-218ENST00000575830 KCNA10Q16322 511 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 KIZQ2M2Z5 673 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 DACT3Q96B18 629 aaPredicted RBP5.02□□□□□ -1.61
CDC27-218ENST00000575830 TRMT2BQ96GJ1 504 aaKnown RBP5.02□□□□□ -1.61
CDC27-218ENST00000575830 SIGLEC10Q96LC7 697 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 MRPL4Q9BYD3 311 aaKnown RBP5.02□□□□□ -1.61
CDC27-218ENST00000575830 EPB41L1Q9H4G0 881 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 ZSWIM4Q9H7M6 989 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 KANSL2Q9H9L4 492 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 TMEM260Q9NX78 707 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 PTCH2Q9Y6C5 1203 aa5.02□□□□□ -1.61
CDC27-218ENST00000575830 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.01□□□□□ -1.61
CDC27-218ENST00000575830 NCAM1P13591 858 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 CFPP27918 469 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 LINC00310P59036 64 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 ZNF200P98182 395 aaPredicted RBP5.01□□□□□ -1.61
CDC27-218ENST00000575830 CACNB2Q08289 660 aaPredicted RBP5.01□□□□□ -1.61
CDC27-218ENST00000575830 SSPNQ14714 243 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 TARBP2Q15633 366 aaKnown RBP5.01□□□□□ -1.61
CDC27-218ENST00000575830 B3GNT8Q7Z7M8 397 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 ANKLE2Q86XL3 938 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 SLC7A14Q8TBB6 771 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 RNPC3Q96LT9 517 aaKnown RBP5.01□□□□□ -1.61
CDC27-218ENST00000575830 CDC6Q99741 560 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 RXFP1Q9HBX9 757 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 SLC6A20Q9NP91 592 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 CLDND1Q9NY35 253 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 PPARGC1AQ9UBK2 798 aaKnown RBP5.01□□□□□ -1.61
CDC27-218ENST00000575830 SIT1Q9Y3P8 196 aa5.01□□□□□ -1.61
CDC27-218ENST00000575830 TCAF2A6NFQ2 919 aa5□□□□□ -1.61
CDC27-218ENST00000575830 AQP7O14520 342 aa5□□□□□ -1.61
CDC27-218ENST00000575830 HGSO14964 777 aaPredicted RBP5□□□□□ -1.61
CDC27-218ENST00000575830 KCNA6P17658 529 aa5□□□□□ -1.61
CDC27-218ENST00000575830 PMLP29590 882 aa5□□□□□ -1.61
CDC27-218ENST00000575830 PKN1Q16512 942 aa5□□□□□ -1.61
CDC27-218ENST00000575830 OTOP3Q7RTS5 596 aa5□□□□□ -1.61
CDC27-218ENST00000575830 FAM129CQ86XR2 697 aa5□□□□□ -1.61
CDC27-218ENST00000575830 SIAH1Q8IUQ4 282 aa5□□□□□ -1.61
CDC27-218ENST00000575830 LINC00482Q8N8I6 264 aa5□□□□□ -1.61
CDC27-218ENST00000575830 TTLL11Q8NHH1 800 aa5□□□□□ -1.61
CDC27-218ENST00000575830 PCDH19Q8TAB3 1148 aa5□□□□□ -1.61
CDC27-218ENST00000575830 PHOSPHO1Q8TCT1 267 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms