RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 CTNNA3Q9UI47 895 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
TVP23B-208ENST00000575261 NCOR1O75376 2440 aa12.19□□□□□ -0.46
TVP23B-208ENST00000575261 BAIAP3O94812 1187 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 PTGISQ16647 500 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 LY6KQ17RY6 165 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 ARHGEF16Q5VV41 709 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 MICALL1Q8N3F8 863 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 PHOSPHO2Q8TCD6 241 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 AFAP1L1Q8TED9 768 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 TAAR1Q96RJ0 339 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 FTOQ9C0B1 505 aaKnown RBP eCLIP12.18□□□□□ -0.46
TVP23B-208ENST00000575261 ZSWIM5Q9P217 1185 aa12.18□□□□□ -0.46
TVP23B-208ENST00000575261 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
TVP23B-208ENST00000575261 CFBP00751 764 aa12.17□□□□□ -0.46
TVP23B-208ENST00000575261 EIF2AK2P19525 551 aaKnown RBP12.17□□□□□ -0.46
TVP23B-208ENST00000575261 CASTP20810 708 aaKnown RBP12.17□□□□□ -0.46
TVP23B-208ENST00000575261 DGKDQ16760 1214 aa12.17□□□□□ -0.46
TVP23B-208ENST00000575261 IFIT1BQ5T764 474 aaKnown RBP12.17□□□□□ -0.46
TVP23B-208ENST00000575261 GDF6Q6KF10 455 aaPredicted RBP12.17□□□□□ -0.46
TVP23B-208ENST00000575261 CHST3Q7LGC8 479 aa12.17□□□□□ -0.46
TVP23B-208ENST00000575261 ADAMTS19Q8TE59 1207 aa12.17□□□□□ -0.46
TVP23B-208ENST00000575261 EMID1Q96A84 441 aaPredicted RBP12.17□□□□□ -0.46
TVP23B-208ENST00000575261 KATNAL1Q9BW62 490 aa12.17□□□□□ -0.46
TVP23B-208ENST00000575261 AMNQ9BXJ7 453 aa12.17□□□□□ -0.46
TVP23B-208ENST00000575261 JMJD4Q9H9V9 463 aa12.17□□□□□ -0.46
TVP23B-208ENST00000575261 PXMP2Q9NR77 195 aa12.17□□□□□ -0.46
TVP23B-208ENST00000575261 MRVI1Q9Y6F6 885 aa12.17□□□□□ -0.46
TVP23B-208ENST00000575261 COL4A4P53420 1690 aaPredicted RBP12.16□□□□□ -0.46
TVP23B-208ENST00000575261 TET1Q8NFU7 2136 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 KIF28PB7ZC32 967 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 EIF3JO75822 258 aaKnown RBP12.16□□□□□ -0.46
TVP23B-208ENST00000575261 PARNO95453 639 aaKnown RBP12.16□□□□□ -0.46
TVP23B-208ENST00000575261 F2P00734 622 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 IGHDP01880 384 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 KCNJ6P48051 423 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 HSD17B4P51659 736 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 RBL2Q08999 1139 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 LRRC8DQ7L1W4 858 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 HERC6Q8IVU3 1022 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 KAT2BQ92831 832 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 UHRF1Q96T88 793 aaPredicted RBP12.16□□□□□ -0.46
TVP23B-208ENST00000575261 VAT1LQ9HCJ6 419 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
TVP23B-208ENST00000575261 GTF2IRD1Q9UHL9 959 aa12.16□□□□□ -0.46
TVP23B-208ENST00000575261 DDX41Q9UJV9 622 aaKnown RBP12.16□□□□□ -0.46
TVP23B-208ENST00000575261 TRIP12Q14669 1992 aaPredicted RBP12.16□□□□□ -0.46
TVP23B-208ENST00000575261 NR3C2P08235 984 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 SELPP16109 830 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 POU3F3P20264 500 aaPredicted RBP12.15□□□□□ -0.46
TVP23B-208ENST00000575261 GHRHRQ02643 423 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 LAMC2Q13753 1193 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
TVP23B-208ENST00000575261 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 STAG2Q8N3U4 1231 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 C7orf31Q8N865 590 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 PPTC7Q8NI37 304 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 CTAGE1Q96RT6 745 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 CERS4Q9HA82 394 aa12.15□□□□□ -0.46
TVP23B-208ENST00000575261 MAP3K20Q9NYL2 800 aaKnown RBP12.15□□□□□ -0.46
TVP23B-208ENST00000575261 PRRC2BQ5JSZ5 2229 aaKnown RBP12.15□□□□□ -0.46
TVP23B-208ENST00000575261 KLRF2D3W0D1 207 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 OPLAHO14841 1288 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 ZBTB5O15062 677 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 TLL1O43897 1013 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 ZNF286BP0CG31 522 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 PSEN2P49810 448 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 WDR5P61964 334 aaKnown RBP12.14□□□□□ -0.47
TVP23B-208ENST00000575261 TAP1Q03518 808 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 TRDNQ13061 729 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 MFSD10Q14728 455 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 SEC23AQ15436 765 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 CNKSR3Q6P9H4 555 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 DHX37Q8IY37 1157 aaKnown RBP12.14□□□□□ -0.47
TVP23B-208ENST00000575261 SAMD3Q8N6K7 520 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 ARNTL2Q8WYA1 636 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 DHX38Q92620 1227 aaKnown RBP12.14□□□□□ -0.47
TVP23B-208ENST00000575261 MTMR8Q96EF0 704 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 PDCD2LQ9BRP1 358 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 IL25Q9H293 177 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 HDAC6Q9UBN7 1215 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 MAD2L2Q9UI95 211 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 MTCH2Q9Y6C9 303 aa12.14□□□□□ -0.47
TVP23B-208ENST00000575261 EPOPA6NHQ4 379 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 RFXAPO00287 272 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 PPP1R11O60927 126 aaPredicted RBP12.13□□□□□ -0.47
TVP23B-208ENST00000575261 EFCAB14O75071 495 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 CXCL10P02778 98 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 CKBP12277 381 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 MYCLP12524 364 aaPredicted RBP12.13□□□□□ -0.47
TVP23B-208ENST00000575261 HOXD8P13378 290 aaPredicted RBP12.13□□□□□ -0.47
TVP23B-208ENST00000575261 TRAF1Q13077 416 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 PTK7Q13308 1070 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 KIAA0753Q2KHM9 967 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 HOMER1Q86YM7 354 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 EXOC6Q8TAG9 804 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms