RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 ARHGAP4P98171 946 aa20.75■□□□□ 0.91
CCDC40-213ENST00000574933 CACNB2Q08289 660 aaPredicted RBP20.75■□□□□ 0.91
CCDC40-213ENST00000574933 SLC9C1Q4G0N8 1177 aa20.75■□□□□ 0.91
CCDC40-213ENST00000574933 IFFO2Q5TF58 517 aa20.75■□□□□ 0.91
CCDC40-213ENST00000574933 DDX49Q9Y6V7 483 aaKnown RBP20.75■□□□□ 0.91
CCDC40-213ENST00000574933 INHAP05111 366 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 ZNF865P0CJ78 1059 aaPredicted RBP20.74■□□□□ 0.91
CCDC40-213ENST00000574933 CIITAP33076 1130 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 UBXN2AP68543 259 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 TRIM32Q13049 653 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 ACVR2BQ13705 512 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 EARS2Q5JPH6 523 aaKnown RBP20.74■□□□□ 0.91
CCDC40-213ENST00000574933 TBCKQ8TEA7 893 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 INPP4AQ96PE3 977 aaPredicted RBP20.74■□□□□ 0.91
CCDC40-213ENST00000574933 MCOLN1Q9GZU1 580 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 CNPY2Q9Y2B0 182 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 UBIAD1Q9Y5Z9 338 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 WDR81Q562E7 1941 aa20.74■□□□□ 0.91
CCDC40-213ENST00000574933 KIF28PB7ZC32 967 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 STX6O43752 255 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 RGS20O76081 388 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 MYCLP12524 364 aaPredicted RBP20.73■□□□□ 0.91
CCDC40-213ENST00000574933 PRKAR2AP13861 404 aaKnown RBP20.73■□□□□ 0.91
CCDC40-213ENST00000574933 TAPT1Q6NXT6 567 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 MOXD1Q6UVY6 613 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 PIK3AP1Q6ZUJ8 805 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 NIPA1Q7RTP0 329 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 NOSTRINQ8IVI9 506 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 TRPV1Q8NER1 839 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 MTMR6Q9Y217 621 aa20.73■□□□□ 0.91
CCDC40-213ENST00000574933 ICAM3P32942 547 aa20.72■□□□□ 0.91
CCDC40-213ENST00000574933 SPRYD3Q8NCJ5 442 aa20.72■□□□□ 0.91
CCDC40-213ENST00000574933 SH3TC2Q8TF17 1288 aa20.72■□□□□ 0.91
CCDC40-213ENST00000574933 ZNF333Q96JL9 665 aa20.72■□□□□ 0.91
CCDC40-213ENST00000574933 TCHHQ07283 1943 aa20.72■□□□□ 0.91
CCDC40-213ENST00000574933 CYP3A7-CYP3A51PA0A087WV96 503 aa20.71■□□□□ 0.91
CCDC40-213ENST00000574933 FAM205CA6NFA0 338 aa20.71■□□□□ 0.91
CCDC40-213ENST00000574933 CYP3A7P24462 503 aa20.71■□□□□ 0.91
CCDC40-213ENST00000574933 INF2Q27J81 1249 aa20.71■□□□□ 0.91
CCDC40-213ENST00000574933 PRAMEF19Q5SWL8 479 aa20.71■□□□□ 0.91
CCDC40-213ENST00000574933 FBXO16Q8IX29 292 aaPredicted RBP20.71■□□□□ 0.91
CCDC40-213ENST00000574933 GPRASP2Q96D09 838 aa20.71■□□□□ 0.91
CCDC40-213ENST00000574933 MBOAT7Q96N66 472 aa20.71■□□□□ 0.91
CCDC40-213ENST00000574933 MXRA8Q9BRK3 442 aa20.71■□□□□ 0.91
CCDC40-213ENST00000574933 MEIS1O00470 390 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 MAFGO15525 162 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 TGFB3P10600 412 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 ITGB5P18084 799 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 DDIT3P35638 169 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 TRAPPC10P48553 1259 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 GNPTABQ3T906 1256 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 CEP55Q53EZ4 464 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 IQSEC1Q6DN90 963 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 KCNV1Q6PIU1 500 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 NEK8Q86SG6 692 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 SCFD2Q8WU76 684 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 JADE2Q9NQC1 790 aa20.7■□□□□ 0.9
CCDC40-213ENST00000574933 IGLV3-22A0A075B6J6 115 aa20.69■□□□□ 0.9
CCDC40-213ENST00000574933 VPS37CA5D8V6 355 aaPredicted RBP20.69■□□□□ 0.9
CCDC40-213ENST00000574933 SEPT4O43236 478 aa20.69■□□□□ 0.9
CCDC40-213ENST00000574933 GCFC2P16383 781 aaKnown RBP20.69■□□□□ 0.9
CCDC40-213ENST00000574933 GNL2Q13823 731 aaKnown RBP20.69■□□□□ 0.9
CCDC40-213ENST00000574933 MCTP1Q6DN14 999 aa20.69■□□□□ 0.9
CCDC40-213ENST00000574933 PPP4R3AQ6IN85 833 aa20.69■□□□□ 0.9
CCDC40-213ENST00000574933 CCDC62Q6P9F0 684 aa20.69■□□□□ 0.9
CCDC40-213ENST00000574933 EEPD1Q7L9B9 569 aa20.69■□□□□ 0.9
CCDC40-213ENST00000574933 BRAPQ7Z569 592 aa20.69■□□□□ 0.9
CCDC40-213ENST00000574933 NLRX1Q86UT6 975 aa20.69■□□□□ 0.9
CCDC40-213ENST00000574933 NAP1L4Q99733 375 aaKnown RBP20.69■□□□□ 0.9
CCDC40-213ENST00000574933 HMX1Q9NP08 348 aaPredicted RBP20.69■□□□□ 0.9
CCDC40-213ENST00000574933 PDGFCQ9NRA1 345 aa20.69■□□□□ 0.9
CCDC40-213ENST00000574933 ZHX1Q9UKY1 873 aaPredicted RBP20.69■□□□□ 0.9
CCDC40-213ENST00000574933 SPATA31C2B4DYI2 1134 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 FAM86B1E9PN63 330 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 FAM86B2P0C5J1 330 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 AKR1A1P14550 325 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 CCND3P30281 292 aaPredicted RBP20.68■□□□□ 0.9
CCDC40-213ENST00000574933 SEMA3FQ13275 785 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 CCDC144BQ3MJ40 725 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 LENG9Q96B70 501 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 CDHR1Q96JP9 859 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 PAK6Q9NQU5 681 aaPredicted RBP20.68■□□□□ 0.9
CCDC40-213ENST00000574933 RTEL1Q9NZ71 1219 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 FAM184BQ9ULE4 1060 aa20.68■□□□□ 0.9
CCDC40-213ENST00000574933 NKRFO15226 690 aaKnown RBP eCLIP20.67■□□□□ 0.9
CCDC40-213ENST00000574933 FIBPO43427 364 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 ZNF76P36508 570 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 SETQ01105 290 aaPredicted RBP20.67■□□□□ 0.9
CCDC40-213ENST00000574933 RESTQ13127 1097 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 ORC2Q13416 577 aaPredicted RBP20.67■□□□□ 0.9
CCDC40-213ENST00000574933 TTLL4Q14679 1199 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 Q4G0T1 1027 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 DUSP28Q4G0W2 176 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 SEPT14Q6ZU15 432 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 CYP2W1Q8TAV3 490 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 ZFP91Q96JP5 570 aaPredicted RBP20.67■□□□□ 0.9
CCDC40-213ENST00000574933 SENP7Q9BQF6 1050 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 WDR11Q9BZH6 1224 aa20.67■□□□□ 0.9
CCDC40-213ENST00000574933 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.67■□□□□ 0.9
CCDC40-213ENST00000574933 ZSCAN16Q9H4T2 348 aaPredicted RBP20.67■□□□□ 0.9
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