RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 MAP3K20Q9NYL2 800 aaKnown RBP16.62■□□□□ 0.25
TVP23A-208ENST00000573857 ERICH2A1L162 156 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 SGSM2O43147 1006 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 ATP2A2P16615 1042 aaKnown RBP16.61■□□□□ 0.25
TVP23A-208ENST00000573857 RFC2P35250 354 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 RABGGTBP53611 331 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 IRX6P78412 446 aaPredicted RBP16.61■□□□□ 0.25
TVP23A-208ENST00000573857 BFSP2Q13515 415 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 DGKDQ16760 1214 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 RALYLQ86SE5 291 aaKnown RBP16.61■□□□□ 0.25
TVP23A-208ENST00000573857 SESTD1Q86VW0 696 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 KAT2BQ92831 832 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 EMID1Q96A84 441 aaPredicted RBP16.61■□□□□ 0.25
TVP23A-208ENST00000573857 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 DDX41Q9UJV9 622 aaKnown RBP16.61■□□□□ 0.25
TVP23A-208ENST00000573857 NOD1Q9Y239 953 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 TTC28Q96AY4 2481 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 XIRP2A4UGR9 3374 aa16.61■□□□□ 0.25
TVP23A-208ENST00000573857 E7EWF7 191 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 IQCF3P0C7M6 154 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 CASTP20810 708 aaKnown RBP16.6■□□□□ 0.25
TVP23A-208ENST00000573857 HOXA13P31271 388 aaPredicted RBP16.6■□□□□ 0.25
TVP23A-208ENST00000573857 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
TVP23A-208ENST00000573857 PTGISQ16647 500 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 GDF6Q6KF10 455 aaPredicted RBP16.6■□□□□ 0.25
TVP23A-208ENST00000573857 STOX1Q6ZVD7 989 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 HOMER1Q86YM7 354 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 SAMD3Q8N6K7 520 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 NCOA7Q8NI08 942 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 PPTC7Q8NI37 304 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 CTAGE1Q96RT6 745 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 PDCD2LQ9BRP1 358 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 RIOX1Q9H6W3 641 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 PCDHA11Q9Y5I1 949 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 MYH6P13533 1939 aa16.6■□□□□ 0.25
TVP23A-208ENST00000573857 REV3LO60673 3130 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 CYTH3O43739 400 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 RGS20O76081 388 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 ACTN1P12814 892 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 MYOGP15173 224 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 TROAPQ12815 778 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 TRAF1Q13077 416 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 LAMC2Q13753 1193 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 ADGRE1Q14246 886 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 WTAPQ15007 396 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 PPP2R2DQ66LE6 453 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 PIGSQ96S52 555 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 MYO9BQ13459 2157 aa16.59■□□□□ 0.25
TVP23A-208ENST00000573857 KIAA1217Q5T5P2 1943 aa16.58■□□□□ 0.25
TVP23A-208ENST00000573857 TRANK1O15050 2925 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 GCOM1H8Y6P7 765 aaPredicted RBP16.58■□□□□ 0.24
TVP23A-208ENST00000573857 F2P00734 622 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 NEFLP07196 543 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 POLR2MP0CAP2 368 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 MYCLP12524 364 aaPredicted RBP16.58■□□□□ 0.24
TVP23A-208ENST00000573857 ANTXR2P58335 489 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 PGM5Q15124 567 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 TMEM67Q5HYA8 995 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 VSIG10LQ86VR7 867 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 DHX37Q8IY37 1157 aaKnown RBP16.58■□□□□ 0.24
TVP23A-208ENST00000573857 CCDC155Q8N6L0 562 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 IL31RAQ8NI17 732 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 AFAP1L1Q8TED9 768 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 MAP4K1Q92918 833 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 KATNAL1Q9BW62 490 aa16.58■□□□□ 0.24
TVP23A-208ENST00000573857 FTOQ9C0B1 505 aaKnown RBP eCLIP16.58■□□□□ 0.24
TVP23A-208ENST00000573857 SCN5AQ14524 2016 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 TANC1Q9C0D5 1861 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 PNMA6FA0A0J9YX94 578 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 ZNF286BP0CG31 522 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 HOXD8P13378 290 aaPredicted RBP16.57■□□□□ 0.24
TVP23A-208ENST00000573857 PSEN2P49810 448 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 MB21D2Q8IYB1 491 aaPredicted RBP16.57■□□□□ 0.24
TVP23A-208ENST00000573857 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 IGDCC4Q8TDY8 1250 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 DHX38Q92620 1227 aaKnown RBP16.57■□□□□ 0.24
TVP23A-208ENST00000573857 SLC9A7Q96T83 725 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 HDAC6Q9UBN7 1215 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 GTF2IRD1Q9UHL9 959 aa16.57■□□□□ 0.24
TVP23A-208ENST00000573857 RBM8AQ9Y5S9 174 aaKnown RBP16.57■□□□□ 0.24
TVP23A-208ENST00000573857 GBF1Q92538 1859 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 HAS3O00219 553 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 IGFBP4P22692 258 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 CCND2P30279 289 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 RBL2Q08999 1139 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 MFSD10Q14728 455 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 CELF3Q5SZQ8 465 aaKnown RBP16.56■□□□□ 0.24
TVP23A-208ENST00000573857 MYSM1Q5VVJ2 828 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 FCHSD1Q86WN1 690 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 PHOSPHO2Q8TCD6 241 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 PPM1EQ8WY54 764 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 SPATA33Q96N06 139 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 PRDM6Q9NQX0 595 aa16.56■□□□□ 0.24
TVP23A-208ENST00000573857 PPFIA4O75335 1185 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms