RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 SH2B2O14492 632 aaPredicted RBP24.07■■□□□ 1.44
CHRNB1-204ENST00000572857 PSRC1Q6PGN9 363 aaPredicted RBP24.07■■□□□ 1.44
CHRNB1-204ENST00000572857 TMTC2Q8N394 836 aa24.07■■□□□ 1.44
CHRNB1-204ENST00000572857 SAMD3Q8N6K7 520 aa24.07■■□□□ 1.44
CHRNB1-204ENST00000572857 ZFP91Q96JP5 570 aaPredicted RBP24.07■■□□□ 1.44
CHRNB1-204ENST00000572857 MTA3Q9BTC8 594 aa24.07■■□□□ 1.44
CHRNB1-204ENST00000572857 LRRC2Q9BYS8 371 aa24.07■■□□□ 1.44
CHRNB1-204ENST00000572857 MMP3P08254 477 aa24.06■■□□□ 1.44
CHRNB1-204ENST00000572857 RXRAP19793 462 aa24.06■■□□□ 1.44
CHRNB1-204ENST00000572857 RAB11FIP4Q86YS3 637 aa24.06■■□□□ 1.44
CHRNB1-204ENST00000572857 IL31RAQ8NI17 732 aa24.06■■□□□ 1.44
CHRNB1-204ENST00000572857 RRP36Q96EU6 259 aaKnown RBP24.06■■□□□ 1.44
CHRNB1-204ENST00000572857 MAP3K14Q99558 947 aa24.06■■□□□ 1.44
CHRNB1-204ENST00000572857 WNT8AQ9H1J5 351 aa24.06■■□□□ 1.44
CHRNB1-204ENST00000572857 SORBS3O60504 671 aa24.05■■□□□ 1.44
CHRNB1-204ENST00000572857 FGBP02675 491 aa24.05■■□□□ 1.44
CHRNB1-204ENST00000572857 PGM5Q15124 567 aa24.05■■□□□ 1.44
CHRNB1-204ENST00000572857 NFRKBQ6P4R8 1299 aa24.05■■□□□ 1.44
CHRNB1-204ENST00000572857 VSIG10LQ86VR7 867 aa24.05■■□□□ 1.44
CHRNB1-204ENST00000572857 SCLYQ96I15 445 aa24.05■■□□□ 1.44
CHRNB1-204ENST00000572857 TTYH1Q9H313 450 aaPredicted RBP24.05■■□□□ 1.44
CHRNB1-204ENST00000572857 BAZ2BQ9UIF8 2168 aaKnown RBP24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 PLEKHA8P1O95397 391 aa24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 CASTP20810 708 aaKnown RBP24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 CCND2P30279 289 aa24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 GNAQP50148 359 aa24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 RNF20Q5VTR2 975 aa24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 DHX37Q8IY37 1157 aaKnown RBP24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 CMTR1Q8N1G2 835 aaKnown RBP24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 CDX2Q99626 313 aaPredicted RBP24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 LZTS2Q9BRK4 669 aa24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 SPZ1Q9BXG8 430 aa24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 SEC63Q9UGP8 760 aaKnown RBP24.04■■□□□ 1.44
CHRNB1-204ENST00000572857 GRXCR1A8MXD5 290 aa24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 RGS20O76081 388 aa24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 LIFRP42702 1097 aa24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 LAMC2Q13753 1193 aa24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 DGKDQ16760 1214 aa24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 OTOP2Q7RTS6 562 aa24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 SRBD1Q8N5C6 995 aaKnown RBP24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 CCDC136Q96JN2 1154 aa24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 NOD1Q9Y239 953 aa24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 SLC12A7Q9Y666 1083 aa24.03■■□□□ 1.44
CHRNB1-204ENST00000572857 CDC45O75419 566 aa24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 DNAJB2P25686 324 aa24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 SMARCA1P28370 1054 aa24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 PTPN11Q06124 597 aaPredicted RBP24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 RASIP1Q5U651 963 aa24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 RPUSD2Q8IZ73 545 aaKnown RBP24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 CCDC82Q8N4S0 544 aa24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 HERVK_113Q902F9 699 aa24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 CXXC1Q9P0U4 656 aaPredicted RBP24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 MYH6P13533 1939 aa24.02■■□□□ 1.44
CHRNB1-204ENST00000572857 CALM1P0DP23 149 aa24.01■■□□□ 1.43
CHRNB1-204ENST00000572857 CALM2P0DP24 149 aa24.01■■□□□ 1.43
CHRNB1-204ENST00000572857 CALM3P0DP25 149 aa24.01■■□□□ 1.43
CHRNB1-204ENST00000572857 KCNV1Q6PIU1 500 aa24.01■■□□□ 1.43
CHRNB1-204ENST00000572857 KAT2BQ92831 832 aa24.01■■□□□ 1.43
CHRNB1-204ENST00000572857 EMID1Q96A84 441 aaPredicted RBP24.01■■□□□ 1.43
CHRNB1-204ENST00000572857 MTIF3Q9H2K0 278 aaKnown RBP24.01■■□□□ 1.43
CHRNB1-204ENST00000572857 GGPS1O95749 300 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 PTGISQ16647 500 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 USP17L6PQ6QN14 398 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 DEFB128Q7Z7B8 93 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 RETREG2Q8NC44 543 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 PPTC7Q8NI37 304 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 SMARCC2Q8TAQ2 1214 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 MYLIPQ8WY64 445 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 GPKOWQ92917 476 aaPredicted RBP eCLIP24■■□□□ 1.43
CHRNB1-204ENST00000572857 CUL5Q93034 780 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 TIFAQ96CG3 184 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 SPATA33Q96N06 139 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 NEK1Q96PY6 1258 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 COL6A3P12111 3177 aa24■■□□□ 1.43
CHRNB1-204ENST00000572857 hCG_1642624A0A1W2PR95 340 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 ZNF286BP0CG31 522 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 PBX2P40425 430 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 SP2Q02086 613 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 CELF3Q5SZQ8 465 aaKnown RBP23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 MYSM1Q5VVJ2 828 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 SYNE3Q6ZMZ3 975 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 MICU3Q86XE3 530 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 FANCBQ8NB91 859 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 TCEANC2Q96MN5 208 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 ALG1Q9BT22 464 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 RTEL1Q9NZ71 1219 aa23.99■■□□□ 1.43
CHRNB1-204ENST00000572857 TMEM265A0A087WTH1 108 aa23.98■■□□□ 1.43
CHRNB1-204ENST00000572857 TGFB3P10600 412 aa23.98■■□□□ 1.43
CHRNB1-204ENST00000572857 PSEN2P49810 448 aa23.98■■□□□ 1.43
CHRNB1-204ENST00000572857 GDF6Q6KF10 455 aaPredicted RBP23.98■■□□□ 1.43
CHRNB1-204ENST00000572857 RASEFQ8IZ41 740 aa23.98■■□□□ 1.43
CHRNB1-204ENST00000572857 C7orf31Q8N865 590 aa23.98■■□□□ 1.43
CHRNB1-204ENST00000572857 PBX4Q9BYU1 374 aa23.98■■□□□ 1.43
CHRNB1-204ENST00000572857 MLXIPQ9HAP2 919 aa23.98■■□□□ 1.43
CHRNB1-204ENST00000572857 ZBBXA8MT70 800 aa23.97■■□□□ 1.43
CHRNB1-204ENST00000572857 UBA1P22314 1058 aaKnown RBP23.97■■□□□ 1.43
CHRNB1-204ENST00000572857 MRPS9P82933 396 aaKnown RBP23.97■■□□□ 1.43
CHRNB1-204ENST00000572857 BFSP2Q13515 415 aa23.97■■□□□ 1.43
CHRNB1-204ENST00000572857 HSDL1Q3SXM5 330 aa23.97■■□□□ 1.43
CHRNB1-204ENST00000572857 VWCEQ96DN2 955 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms