RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 PDLIM7Q9NR12 457 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 SEC63Q9UGP8 760 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 DDX41Q9UJV9 622 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 ELP1O95163 1332 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 LTBP2Q14767 1821 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 B4DLN1 442 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 ARVCFO00192 962 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 DTNBO60941 627 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 PDIA3P30101 505 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 METAP2P50579 478 aaKnown RBP eCLIP11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 EVCP57679 992 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 CCT2P78371 535 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 SP2Q02086 613 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 ARHGAP1Q07960 439 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 FAAP100Q0VG06 881 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 TRAF1Q13077 416 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 SEMA3FQ13275 785 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 TTLL4Q14679 1199 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 NTRK3Q16288 839 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 PKN1Q16512 942 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 SLC43A3Q8NBI5 491 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 SMARCC2Q8TAQ2 1214 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 TM6SF1Q9BZW5 370 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 PSTPIP2Q9H939 334 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 NCOA5Q9HCD5 579 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 PRDM5Q9NQX1 630 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 RTEL1Q9NZ71 1219 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 FRMPD4Q14CM0 1322 aa11.8□□□□□ -0.52
GTF3C1-213ENST00000571886 RANBP2P49792 3224 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 A0A0U1RQG5 324 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 RBAK-RBAKDNI3L0D1 243 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 STXBP3O00186 592 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 NKRFO15226 690 aaKnown RBP eCLIP11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 MYL3P08590 195 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 RCAN1P53805 252 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 PURAQ00577 322 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 ITGA7Q13683 1181 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 ANKRD33Q7Z3H0 272 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 AFG1LQ8WV93 481 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 BADQ92934 168 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 PHKBQ93100 1093 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 PGBD1Q96JS3 809 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 TELO2Q9Y4R8 837 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 CYP46A1Q9Y6A2 500 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 NID2Q14112 1375 aa11.79□□□□□ -0.52
GTF3C1-213ENST00000571886 A6NJR5 290 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 ZEB2O60315 1214 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 GH1P01241 217 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 CLTBP09497 229 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 CCND2P30279 289 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 BMP8BP34820 402 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 FAM126BQ8IXS8 530 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 CUL5Q93034 780 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 TOX2Q96NM4 488 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 PDRG1Q9NUG6 133 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 TMEM260Q9NX78 707 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 PCDHA6Q9UN73 950 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 PCDHA8Q9Y5H6 950 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 MRVI1Q9Y6F6 885 aa11.78□□□□□ -0.52
GTF3C1-213ENST00000571886 SMCO2A6NFE2 343 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 KIAA0355O15063 1070 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 PRPF3O43395 683 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 CABYRO75952 493 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 CD4P01730 458 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 MMP3P08254 477 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 CPT1AP50416 773 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 FXR1P51114 621 aaKnown RBP eCLIP11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 NAPAP54920 295 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 STK3Q13188 491 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 PFKFB3Q16875 520 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 C8orf34Q49A92 452 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 KAT2BQ92831 832 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 UBE2OQ9C0C9 1292 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 TRPV6Q9H1D0 765 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 TMEM39AQ9NV64 488 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 BARHL2Q9NY43 387 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 TRIOBPQ9H2D6 2365 aa11.77□□□□□ -0.53
GTF3C1-213ENST00000571886 DCDC2CA8MYV0 355 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 SOX1O00570 391 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 B4GALT4O60513 344 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 SCG2P13521 617 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 UBA1P22314 1058 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 ICAM3P32942 547 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 EPHB4P54760 987 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 HSDL1Q3SXM5 330 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 CELF3Q5SZQ8 465 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 MYSM1Q5VVJ2 828 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 PCNX4Q63HM2 1172 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 IL17RAQ96F46 866 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 ZNF274Q96GC6 653 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 INPP4AQ96PE3 977 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 MTG1Q9BT17 334 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 SLC26A6Q9BXS9 759 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 RIC8AQ9NPQ8 531 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms