RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 GH1P01241 217 aa13.19□□□□□ -0.3
LITAF-206ENST00000571277 PTPN11Q06124 597 aaPredicted RBP13.19□□□□□ -0.3
LITAF-206ENST00000571277 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
LITAF-206ENST00000571277 KAT2BQ92831 832 aa13.19□□□□□ -0.3
LITAF-206ENST00000571277 EMID1Q96A84 441 aaPredicted RBP13.19□□□□□ -0.3
LITAF-206ENST00000571277 PIGSQ96S52 555 aa13.19□□□□□ -0.3
LITAF-206ENST00000571277 PDCD2LQ9BRP1 358 aa13.19□□□□□ -0.3
LITAF-206ENST00000571277 MAP3K20Q9NYL2 800 aaKnown RBP13.19□□□□□ -0.3
LITAF-206ENST00000571277 RBM8AQ9Y5S9 174 aaKnown RBP13.19□□□□□ -0.3
LITAF-206ENST00000571277 MYH7BA7E2Y1 1941 aa13.19□□□□□ -0.3
LITAF-206ENST00000571277 MYO9BQ13459 2157 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 TET1Q8NFU7 2136 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 PITPNM1O00562 1244 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 FOSL2P15408 326 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 HOXA13P31271 388 aaPredicted RBP13.18□□□□□ -0.3
LITAF-206ENST00000571277 WTAPQ15007 396 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 FAM47CQ5HY64 1035 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 TMEM67Q5HYA8 995 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 VSIG10LQ86VR7 867 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 HOMER1Q86YM7 354 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 SAMD3Q8N6K7 520 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 IL31RAQ8NI17 732 aa13.18□□□□□ -0.3
LITAF-206ENST00000571277 TRIP12Q14669 1992 aaPredicted RBP13.18□□□□□ -0.3
LITAF-206ENST00000571277 PNMA6FA0A0J9YX94 578 aa13.17□□□□□ -0.3
LITAF-206ENST00000571277 ERICH2A1L162 156 aa13.17□□□□□ -0.3
LITAF-206ENST00000571277 PFKMP08237 780 aa13.17□□□□□ -0.3
LITAF-206ENST00000571277 HOXD8P13378 290 aaPredicted RBP13.17□□□□□ -0.3
LITAF-206ENST00000571277 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
LITAF-206ENST00000571277 PGM5Q15124 567 aa13.17□□□□□ -0.3
LITAF-206ENST00000571277 RPUSD2Q8IZ73 545 aaKnown RBP13.17□□□□□ -0.3
LITAF-206ENST00000571277 LSG1Q9H089 658 aaKnown RBP13.17□□□□□ -0.3
LITAF-206ENST00000571277 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
LITAF-206ENST00000571277 LY9Q9HBG7 655 aa13.17□□□□□ -0.3
LITAF-206ENST00000571277 CHD7Q9P2D1 2997 aa13.17□□□□□ -0.3
LITAF-206ENST00000571277 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
LITAF-206ENST00000571277 MRVI1Q9Y6F6 885 aa13.17□□□□□ -0.3
LITAF-206ENST00000571277 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
LITAF-206ENST00000571277 HAS3O00219 553 aa13.16□□□□□ -0.3
LITAF-206ENST00000571277 F2P00734 622 aa13.16□□□□□ -0.3
LITAF-206ENST00000571277 IQCF3P0C7M6 154 aa13.16□□□□□ -0.3
LITAF-206ENST00000571277 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
LITAF-206ENST00000571277 SP2Q02086 613 aa13.16□□□□□ -0.3
LITAF-206ENST00000571277 DGKDQ16760 1214 aa13.16□□□□□ -0.3
LITAF-206ENST00000571277 MYSM1Q5VVJ2 828 aa13.16□□□□□ -0.3
LITAF-206ENST00000571277 GDF6Q6KF10 455 aaPredicted RBP13.16□□□□□ -0.3
LITAF-206ENST00000571277 PPTC7Q8NI37 304 aa13.16□□□□□ -0.3
LITAF-206ENST00000571277 MAP3K14Q99558 947 aa13.16□□□□□ -0.3
LITAF-206ENST00000571277 COL25A1Q9BXS0 654 aaPredicted RBP13.16□□□□□ -0.3
LITAF-206ENST00000571277 FRMPD4Q14CM0 1322 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 GCOM1H8Y6P7 765 aaPredicted RBP13.15□□□□□ -0.3
LITAF-206ENST00000571277 POLR2MP0CAP2 368 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 MYCLP12524 364 aaPredicted RBP13.15□□□□□ -0.3
LITAF-206ENST00000571277 RABGGTBP53611 331 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 RBL2Q08999 1139 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 TRAF1Q13077 416 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 GPNMBQ14956 572 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 RAB30Q15771 203 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 PTGISQ16647 500 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 HSDL1Q3SXM5 330 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 DEFB128Q7Z7B8 93 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 CATIPQ7Z7H3 387 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 ZNF654Q8IZM8 581 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 USP38Q8NB14 1042 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 DHX38Q92620 1227 aaKnown RBP13.15□□□□□ -0.3
LITAF-206ENST00000571277 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.3
LITAF-206ENST00000571277 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
LITAF-206ENST00000571277 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 MTA3Q9BTC8 594 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 MYL10Q9BUA6 226 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 NKX2-4Q9H2Z4 354 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 PRDM12Q9H4Q4 367 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 GTF2IRD1Q9UHL9 959 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 SLC4A7Q9Y6M7 1214 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 PTPRSQ13332 1948 aa13.15□□□□□ -0.3
LITAF-206ENST00000571277 SPTBN5Q9NRC6 3674 aaKnown RBP13.15□□□□□ -0.31
LITAF-206ENST00000571277 SLC27A2O14975 620 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 PRC1O43663 620 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 DDAH1O94760 285 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 ZNF286BP0CG31 522 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 TGFB3P10600 412 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 MYOGP15173 224 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
LITAF-206ENST00000571277 UBA1P22314 1058 aaKnown RBP13.14□□□□□ -0.31
LITAF-206ENST00000571277 RFC2P35250 354 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
LITAF-206ENST00000571277 ADGRE1Q14246 886 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 NECTIN1Q15223 517 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 CELF3Q5SZQ8 465 aaKnown RBP13.14□□□□□ -0.31
LITAF-206ENST00000571277 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 SKAP1Q86WV1 359 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
LITAF-206ENST00000571277 BCAS3Q9H6U6 928 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
LITAF-206ENST00000571277 DOCK5Q9H7D0 1870 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 ZBBXA8MT70 800 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms