RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 ASB14A6NK59 587 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 MEIS1O00470 390 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 SLC26A4O43511 780 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
CDRT1-206ENST00000571263 NR3C2P08235 984 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 TAL1P17542 331 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-206ENST00000571263 MARCKSP29966 332 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-206ENST00000571263 GRM1Q13255 1194 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 NBR1Q14596 966 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 STXBP2Q15833 593 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 GNPTABQ3T906 1256 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 WDR78Q5VTH9 848 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 PLEKHH3Q7Z736 793 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 ZNF467Q7Z7K2 595 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-206ENST00000571263 FAM133AQ8N9E0 248 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 SYAP1Q96A49 352 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-206ENST00000571263 CHAMP1Q96JM3 812 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 MTMR9Q96QG7 549 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 FTOQ9C0B1 505 aaKnown RBP eCLIP13.5□□□□□ -0.25
CDRT1-206ENST00000571263 COL20A1Q9P218 1284 aa13.5□□□□□ -0.25
CDRT1-206ENST00000571263 FBXO2Q9UK22 296 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-206ENST00000571263 DNAJC25-GNG10A0A024R161 153 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 TDP2O95551 362 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 TXLNAP40222 546 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 FXR2P51116 673 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDRT1-206ENST00000571263 CRHR2Q13324 411 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 KLHL40Q2TBA0 621 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 AXDND1Q5T1B0 1012 aaPredicted RBP13.49□□□□□ -0.25
CDRT1-206ENST00000571263 KCNV1Q6PIU1 500 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 CCDC73Q6ZRK6 1079 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 GPR142Q7Z601 462 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
CDRT1-206ENST00000571263 MRPS27Q92552 414 aaKnown RBP13.49□□□□□ -0.25
CDRT1-206ENST00000571263 GPRASP2Q96D09 838 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 CCDC34Q96HJ3 373 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 EFCC1Q9HA90 598 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 JADE2Q9NQC1 790 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 CPA4Q9UI42 421 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 PCDHA12Q9UN75 941 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 UBIAD1Q9Y5Z9 338 aa13.49□□□□□ -0.25
CDRT1-206ENST00000571263 FAM237AA0A1B0GTK4 181 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 EDIL3O43854 480 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 TRAK2O60296 914 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 MYCLP12524 364 aaPredicted RBP13.48□□□□□ -0.25
CDRT1-206ENST00000571263 EIF2AK2P19525 551 aaKnown RBP13.48□□□□□ -0.25
CDRT1-206ENST00000571263 ALDH5A1P51649 535 aaPredicted RBP13.48□□□□□ -0.25
CDRT1-206ENST00000571263 PRR16Q569H4 304 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 PLA2G4DQ86XP0 818 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 RIT2Q99578 217 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 PORCNQ9H237 461 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 KCNMB3Q9NPA1 279 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 TBC1D22BQ9NU19 505 aa13.48□□□□□ -0.25
CDRT1-206ENST00000571263 TCHHQ07283 1943 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 IGLV3-22A0A075B6J6 115 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 VWA3AA6NCI4 1184 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 FAM86B1E9PN63 330 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 WNT7AO00755 349 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 SLC37A4O43826 429 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 AOC2O75106 756 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 GADD45BO75293 160 aaPredicted RBP13.47□□□□□ -0.25
CDRT1-206ENST00000571263 FAM86B2P0C5J1 330 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 EDNRBP24530 442 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 TXKP42681 527 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 VEGFBP49765 207 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 PDE4DQ08499 809 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 MTMR1Q13613 665 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 GRB14Q14449 540 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 KIF22Q14807 665 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 RESP18Q5W5W9 173 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 DPP9Q86TI2 863 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 POTEDQ86YR6 584 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 GIMAP8Q8ND71 665 aaPredicted RBP13.47□□□□□ -0.25
CDRT1-206ENST00000571263 MORC4Q8TE76 937 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 WDR11Q9BZH6 1224 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 TTC12Q9H892 705 aaPredicted RBP13.47□□□□□ -0.25
CDRT1-206ENST00000571263 SAGE1Q9NXZ1 904 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 CCDC39Q9UFE4 941 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 USP25Q9UHP3 1055 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 TCEAL9Q9UHQ7 104 aa13.47□□□□□ -0.25
CDRT1-206ENST00000571263 PEX10O60683 326 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 LETM1O95202 739 aaPredicted RBP13.46□□□□□ -0.25
CDRT1-206ENST00000571263 TGFB3P10600 412 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 ADORA2AP29274 412 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 UBA7P41226 1012 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 FCGRTP55899 365 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 MRPS9P82933 396 aaKnown RBP13.46□□□□□ -0.25
CDRT1-206ENST00000571263 FAM160A1Q05DH4 1040 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 IRF5Q13568 498 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 ZNF792Q3KQV3 632 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 IGSF22Q8N9C0 903 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 FSIP1Q8NA03 581 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 ERMNQ8TAM6 284 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 ETNPPLQ8TBG4 499 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 SOCS4Q8WXH5 440 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 SLC5A5Q92911 643 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 LENG9Q96B70 501 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 TIGD1Q96MW7 591 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms