RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	U2AF1L4	Q8WU68	220 aa	Known RBP	13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	LENG1	Q96BZ8	264 aa	Predicted RBP	13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ZFP91	Q96JP5	570 aa	Predicted RBP	13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PHF20	Q9BVI0	1012 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ANO3	Q9BYT9	981 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	GJB4	Q9NTQ9	266 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PCDHA4	Q9UN74	947 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	KCNJ14	Q9UNX9	436 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ADCY6	O43306	1168 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	CAPN15	O75808	1086 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	EIF3J	O75822	258 aa	Known RBP	13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TFRC	P02786	760 aa	Known RBP	13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	RARB	P10826	455 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TNFAIP2	Q03169	654 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TRIM29	Q14134	588 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PCNX4	Q63HM2	1172 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	LHX8	Q68G74	356 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	MCTP2	Q6DN12	878 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SEPT14	Q6ZU15	432 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	VSIG10L	Q86VR7	867 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	BLID	Q8IZY5	108 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	FAM184A	Q8NB25	1140 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	RASGRP4	Q8TDF6	673 aa		13.23	□□□□□ -0.29
ATP2A3-208	ENST00000570845	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845		K7ELQ4	463 aa	Predicted RBP	13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	EN2	P19622	333 aa	Predicted RBP	13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	MRPS9	P82933	396 aa	Known RBP	13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	NPY5R	Q15761	445 aa		13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	IQSEC1	Q6DN90	963 aa		13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	GALNT17	Q6IS24	598 aa		13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	DAGLB	Q8NCG7	672 aa		13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SCFD2	Q8WU76	684 aa		13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	WDR11	Q9BZH6	1224 aa		13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	CRISPLD2	Q9H0B8	497 aa		13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	XPNPEP3	Q9NQH7	507 aa		13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PDE4DIP	Q5VU43	2346 aa		13.22	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SYNRG	Q9UMZ2	1314 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	RBM47	A0AV96	593 aa	Known RBP	13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	DUSP11	O75319	330 aa	Known RBP	13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	STAM2	O75886	525 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	RGS20	O76081	388 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	MYCN	P04198	464 aa	Predicted RBP	13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TXN	P10599	105 aa	Known RBP	13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SMPD1	P17405	629 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SREBF1	P36956	1147 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TTLL4	Q14679	1199 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TMEM63B	Q5T3F8	832 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	GJC2	Q5T442	439 aa	Predicted RBP	13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	KRT40	Q6A162	431 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	XRRA1	Q6P2D8	792 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	HSCB	Q8IWL3	235 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SNX21	Q969T3	373 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	C8orf76	Q96K31	380 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	RTEL1	Q9NZ71	1219 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	OGDHL	Q9ULD0	1010 aa		13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.21	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ARID2	Q68CP9	1835 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845		M0R2N6	131 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	ARIH2	O95376	493 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	PGK1	P00558	417 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	MMP1	P03956	469 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	PTGS1	P23219	599 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GJB2	P29033	226 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	KRT2	P35908	639 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	ARHGAP4	P98171	946 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GUCY1B3	Q02153	619 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CUL4A	Q13619	759 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GNPTAB	Q3T906	1256 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	DUSP28	Q4G0W2	176 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	TLK2	Q86UE8	772 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	OXER1	Q8TDS5	423 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	INPP4A	Q96PE3	977 aa	Predicted RBP	13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	BRMS1	Q9HCU9	246 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	SMC3	Q9UQE7	1217 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GNE	Q9Y223	722 aa	Known RBP	13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	KIF3A	Q9Y496	699 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	MRVI1	Q9Y6F6	885 aa		13.2	□□□□□ -0.3
ATP2A3-208	ENST00000570845	NKRF	O15226	690 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CAPN2	P17655	700 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	ZNF76	P36508	570 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	NONO	Q15233	471 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	LY6K	Q17RY6	165 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CCDC62	Q6P9F0	684 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	KCNV1	Q6PIU1	500 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	KRT25	Q7Z3Z0	450 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	NLRX1	Q86UT6	975 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	ANKLE1	Q8NAG6	615 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	ARRDC4	Q8NCT1	418 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	COPS5	Q92905	334 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	AP5M1	Q9H0R1	490 aa		13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	UPF3A	Q9H1J1	476 aa	Known RBP	13.19	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CCDC194	A0A1B0GVG4	234 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	KBTBD13	C9JR72	458 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	DYNC1LI2	O43237	492 aa	Predicted RBP	13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	FIBP	O43427	364 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	ADAMTS4	O75173	837 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	FARP2	O94887	1054 aa	Predicted RBP	13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	C6orf222	P0C671	652 aa	Predicted RBP	13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	ITGB5	P18084	799 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GJA9	P57773	515 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms