RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ERCC3P19447 782 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 MAPK4P31152 587 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 HOXA13P31271 388 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 DDIT3P35638 169 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 TM4SF4P48230 202 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 KRT85P78386 507 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 HTRA3P83110 453 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 RESTQ13127 1097 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 NR5A1Q13285 461 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 CRHR2Q13324 411 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 PKP1Q13835 747 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 KIF22Q14807 665 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 FOXD4L6Q3SYB3 417 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 RILPL1Q5EBL4 403 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 JAKMIP3Q5VZ66 844 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 FOXD4L3Q6VB84 417 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 FCHSD1Q86WN1 690 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 SAMD3Q8N6K7 520 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 RASGRP4Q8TDF6 673 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 MMP19Q99542 508 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 NAP1L4Q99733 375 aaKnown RBP7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 MOV10L1Q9BXT6 1211 aaKnown RBP7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 ANO3Q9BYT9 981 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 TXNRD2Q9NNW7 524 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 MAP3K20Q9NYL2 800 aaKnown RBP7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 MORF4L1Q9UBU8 362 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 BIN2Q9UBW5 565 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 CPA4Q9UI42 421 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 CEP131Q9UPN4 1083 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 THSD7BQ9C0I4 1608 aa7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 POLR2AP24928 1970 aaKnown RBP7.51□□□□□ -1.21
CTDNEP1-204ENST00000570484 B4DLN1 442 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 KIF28PB7ZC32 967 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 PIK3CDO00329 1044 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 CNMDO75829 334 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 FCER1AP12319 257 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 ATP2B1P20020 1258 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 U2AF2P26368 475 aaKnown RBP eCLIP7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 TRAPPC10P48553 1259 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 HSD17B4P51659 736 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 MDM2Q00987 491 aaPredicted RBP7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 MUM1L1Q5H9M0 696 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 MYSM1Q5VVJ2 828 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 USP17L6PQ6QN14 398 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 SLC30A10Q6XR72 485 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 NEK8Q86SG6 692 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 PGBD1Q96JS3 809 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 MAF1Q9H063 256 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 TMEM260Q9NX78 707 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 SLC5A4Q9NY91 659 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 RBPJLQ9UBG7 517 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 ADD3Q9UEY8 706 aaKnown RBP7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 PCDHA6Q9UN73 950 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 RIPK3Q9Y572 518 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 PCDHA8Q9Y5H6 950 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 ADGRA2Q96PE1 1338 aa7.5□□□□□ -1.21
CTDNEP1-204ENST00000570484 PTPRFP10586 1907 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 TNPO2O14787 897 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 FIBPO43427 364 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 PEX10O60683 326 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 BMP15O95972 392 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 GCFC2P16383 781 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 ZNF76P36508 570 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 FCGRTP55899 365 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 RPS6P62753 249 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 MAP2K1Q02750 393 aaPredicted RBP7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 SF3A1Q15459 793 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 INF2Q27J81 1249 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 LETM2Q2VYF4 491 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 TTC38Q5R3I4 469 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 ARHGEF16Q5VV41 709 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 ATL3Q6DD88 541 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 GPR142Q7Z601 462 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 PLEKHH3Q7Z736 793 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 TBCKQ8TEA7 893 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 SOCS4Q8WXH5 440 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 CLEC4DQ8WXI8 215 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 SHISA4Q96DD7 197 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 ZIC5Q96T25 663 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 RMDN3Q96TC7 470 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 PORCNQ9H237 461 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 EFCC1Q9HA90 598 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 A1CFQ9NQ94 594 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 SAGE1Q9NXZ1 904 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 CYP39A1Q9NYL5 469 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 TCEAL9Q9UHQ7 104 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 CFAP45Q9UL16 551 aa7.49□□□□□ -1.21
CTDNEP1-204ENST00000570484 RBBP6Q7Z6E9 1792 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 MEIS2O14770 477 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 OPLAHO14841 1288 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 STRNO43815 780 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 MARCH6O60337 910 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 NEMFO60524 1076 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 CCNT1O60563 726 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 TRPA1O75762 1119 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 BCRP11274 1271 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 EIF2AK2P19525 551 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 CCND2P30279 289 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 SREBF1P36956 1147 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms