RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 RASGRF1Q13972 1273 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 ACBD5Q5T8D3 534 aaPredicted RBP9.01□□□□□ -0.97
TCF4-246ENST00000570287 C1orf53Q5VUE5 145 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 FBXL19Q6PCT2 694 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 ATL2Q8NHH9 583 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 PPM1EQ8WY54 764 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 SMARCC1Q92922 1105 aaPredicted RBP9.01□□□□□ -0.97
TCF4-246ENST00000570287 ACSBG1Q96GR2 724 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 FTOQ9C0B1 505 aaKnown RBP eCLIP9.01□□□□□ -0.97
TCF4-246ENST00000570287 TNKS2Q9H2K2 1166 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 B2RBV5 119 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 NBNO60934 754 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 CDKL5O76039 1030 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 Q3C1V9 767 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 SH3PXD2AQ5TCZ1 1133 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 SPICE1Q8N0Z3 855 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 ENGASEQ8NFI3 743 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 SHDQ96IW2 340 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 ARHGAP9Q9BRR9 750 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 MUC3BQ9H195 1237 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 SEC31BQ9NQW1 1179 aa9.01□□□□□ -0.97
TCF4-246ENST00000570287 MYH14Q7Z406 1995 aaKnown RBP9.01□□□□□ -0.97
TCF4-246ENST00000570287 A0A1W2PQ27 194 aa9□□□□□ -0.97
TCF4-246ENST00000570287 A0A1W2PQ64 194 aa9□□□□□ -0.97
TCF4-246ENST00000570287 A0A1W2PQD8 194 aa9□□□□□ -0.97
TCF4-246ENST00000570287 KLHL33A6NCF5 533 aa9□□□□□ -0.97
TCF4-246ENST00000570287 YEATS4O95619 227 aa9□□□□□ -0.97
TCF4-246ENST00000570287 IVLP07476 585 aa9□□□□□ -0.97
TCF4-246ENST00000570287 ME1P48163 572 aa9□□□□□ -0.97
TCF4-246ENST00000570287 RASSF7Q02833 373 aa9□□□□□ -0.97
TCF4-246ENST00000570287 SMC1AQ14683 1233 aaKnown RBP9□□□□□ -0.97
TCF4-246ENST00000570287 C2orf27AQ580R0 203 aa9□□□□□ -0.97
TCF4-246ENST00000570287 ADALQ6DHV7 355 aa9□□□□□ -0.97
TCF4-246ENST00000570287 CC2D1AQ6P1N0 951 aaPredicted RBP9□□□□□ -0.97
TCF4-246ENST00000570287 CYB5R4Q7L1T6 521 aa9□□□□□ -0.97
TCF4-246ENST00000570287 MAGEB6Q8N7X4 407 aa9□□□□□ -0.97
TCF4-246ENST00000570287 CXorf38Q8TB03 319 aa9□□□□□ -0.97
TCF4-246ENST00000570287 KCNG4Q8TDN1 519 aa9□□□□□ -0.97
TCF4-246ENST00000570287 GOLPH3LQ9H4A5 285 aa9□□□□□ -0.97
TCF4-246ENST00000570287 SERTAD1Q9UHV2 236 aa9□□□□□ -0.97
TCF4-246ENST00000570287 NIP7Q9Y221 180 aaKnown RBP eCLIP9□□□□□ -0.97
TCF4-246ENST00000570287 ZNF652Q9Y2D9 606 aa9□□□□□ -0.97
TCF4-246ENST00000570287 A0A0G2JS52 829 aa9□□□□□ -0.97
TCF4-246ENST00000570287 KINO60870 393 aaKnown RBP9□□□□□ -0.97
TCF4-246ENST00000570287 PPFIA3O75145 1194 aa9□□□□□ -0.97
TCF4-246ENST00000570287 GNAT2P19087 354 aa9□□□□□ -0.97
TCF4-246ENST00000570287 METAP2P50579 478 aaKnown RBP eCLIP9□□□□□ -0.97
TCF4-246ENST00000570287 MTERF2Q49AM1 385 aa9□□□□□ -0.97
TCF4-246ENST00000570287 CPLX2Q6PUV4 134 aaKnown RBP9□□□□□ -0.97
TCF4-246ENST00000570287 SGMS1Q86VZ5 419 aa9□□□□□ -0.97
TCF4-246ENST00000570287 IFNL3Q8IZI9 196 aa9□□□□□ -0.97
TCF4-246ENST00000570287 MTMR8Q96EF0 704 aa9□□□□□ -0.97
TCF4-246ENST00000570287 DNAJC25Q9H1X3 360 aa9□□□□□ -0.97
TCF4-246ENST00000570287 DONSONQ9NYP3 566 aa9□□□□□ -0.97
TCF4-246ENST00000570287 LUZP4Q9P127 313 aa9□□□□□ -0.97
TCF4-246ENST00000570287 ADAM21Q9UKJ8 722 aa9□□□□□ -0.97
TCF4-246ENST00000570287 TLR6Q9Y2C9 796 aa9□□□□□ -0.97
TCF4-246ENST00000570287 ZNF831Q5JPB2 1677 aa9□□□□□ -0.97
TCF4-246ENST00000570287 TIAM2Q8IVF5 1701 aa9□□□□□ -0.97
TCF4-246ENST00000570287 PNPLA7Q6ZV29 1317 aa9□□□□□ -0.97
TCF4-246ENST00000570287 POLR3GO15318 223 aaPredicted RBP9□□□□□ -0.97
TCF4-246ENST00000570287 EPB42P16452 691 aa9□□□□□ -0.97
TCF4-246ENST00000570287 SERPINB3P29508 390 aa9□□□□□ -0.97
TCF4-246ENST00000570287 FSIP1Q8NA03 581 aa9□□□□□ -0.97
TCF4-246ENST00000570287 LINC00301Q8NCQ3 95 aa9□□□□□ -0.97
TCF4-246ENST00000570287 MRPS27Q92552 414 aaKnown RBP9□□□□□ -0.97
TCF4-246ENST00000570287 NAPBQ9H115 298 aa9□□□□□ -0.97
TCF4-246ENST00000570287 CNNM2Q9H8M5 875 aa9□□□□□ -0.97
TCF4-246ENST00000570287 PCDHA7Q9UN72 937 aa9□□□□□ -0.97
TCF4-246ENST00000570287 BCORQ6W2J9 1755 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 COL5A3P25940 1745 aaPredicted RBP8.99□□□□□ -0.97
TCF4-246ENST00000570287 B4E1Z4 1266 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 MBD4O95243 580 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 PDGFAP04085 211 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 LIFRP42702 1097 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 STK38Q15208 465 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 STX1AQ16623 288 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 TMEM95Q3KNT9 176 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 TTC31Q49AM3 519 aaPredicted RBP8.99□□□□□ -0.97
TCF4-246ENST00000570287 MORN1Q5T089 497 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 APOA5Q6Q788 366 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 IGDCC4Q8TDY8 1250 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 CDC5LQ99459 802 aaKnown RBP8.99□□□□□ -0.97
TCF4-246ENST00000570287 EPB41L4AQ9HCS5 686 aaPredicted RBP8.99□□□□□ -0.97
TCF4-246ENST00000570287 NEDD4P46934 1319 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 CHD4Q14839 1912 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 MAP2K7O14733 419 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 TNFRSF21O75509 655 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 KIF23Q02241 960 aaPredicted RBP8.99□□□□□ -0.97
TCF4-246ENST00000570287 IFRD2Q12894 506 aaPredicted RBP8.99□□□□□ -0.97
TCF4-246ENST00000570287 C11orf91Q3C1V1 193 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 ANO1Q5XXA6 986 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 OTUD7BQ6GQQ9 843 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 DHX40Q8IX18 779 aaKnown RBP8.99□□□□□ -0.97
TCF4-246ENST00000570287 FUT8Q9BYC5 575 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 TRIM8Q9BZR9 551 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 KRT23Q9C075 422 aa8.99□□□□□ -0.97
TCF4-246ENST00000570287 ZCCHC17Q9NP64 241 aaKnown RBP8.99□□□□□ -0.97
TCF4-246ENST00000570287 TRMT1Q9NXH9 659 aaKnown RBP8.99□□□□□ -0.97
TCF4-246ENST00000570287 HDAC9Q9UKV0 1011 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms