RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 TXNP10599 105 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 SCG2P13521 617 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 FDPSP14324 419 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 ITGB8P26012 769 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 NAPAP54920 295 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 RTP1P59025 263 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 ANAPC15P60006 121 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 TLE2Q04725 743 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 PFKFB3Q16875 520 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 DUSP28Q4G0W2 176 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 ARRDC4Q8NCT1 418 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 ZNF274Q96GC6 653 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 PKD2L1Q9P0L9 805 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 DDX41Q9UJV9 622 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 PCDHA6Q9UN73 950 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 KCNJ14Q9UNX9 436 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 ATP11BQ9Y2G3 1177 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 PCDHA8Q9Y5H6 950 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 EVI5O60447 810 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 MSCO60682 206 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 MYL3P08590 195 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 IFNAR1P17181 557 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 NPY5RQ15761 445 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 STXBP2Q15833 593 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 FSCN1Q16658 493 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 OR6J1Q8NGC5 347 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 SMARCC2Q8TAQ2 1214 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 ALDH8A1Q9H2A2 487 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 RIC8AQ9NPQ8 531 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 PNMA2Q9UL42 364 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 LRRC37A2A6NM11 1700 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 ALPK3Q96L96 1907 aa11.29□□□□□ -0.6
GTF3C1-212ENST00000570129 NID2Q14112 1375 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 KBTBD13C9JR72 458 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 PIK3CDO00329 1044 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 EIF3JO75822 258 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 ITGB5P18084 799 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 CHMP4BP1P59074 171 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 HIC1Q14526 733 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 RNF180Q86T96 592 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 GJA10Q969M2 543 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 IWS1Q96ST2 819 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 AP5M1Q9H0R1 490 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 TRPV6Q9H1D0 765 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 SLKQ9H2G2 1235 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 RANBP2P49792 3224 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 FRMPD4Q14CM0 1322 aa11.28□□□□□ -0.6
GTF3C1-212ENST00000570129 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 SPATA31C2B4DYI2 1134 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 PQBP1O60828 265 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 ARP10275 920 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 CCND2P30279 289 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 CLK2P49760 499 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 CDK7P50613 346 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 ADCY7P51828 1080 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 RCAN1P53805 252 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 NKX3-2P78367 333 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 SSRP1Q08945 709 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 SCFD2Q8WU76 684 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 KAT2BQ92831 832 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 FRMPD3Q5JV73 1810 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 MYH6P13533 1939 aa11.27□□□□□ -0.61
GTF3C1-212ENST00000570129 GGPS1O95749 300 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 UBA1P22314 1058 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 CST5P28325 142 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 RBM25P49756 843 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 MDM2Q00987 491 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 SP4Q02446 784 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 PPP2R5BQ15173 497 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 HSDL1Q3SXM5 330 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 EARS2Q5JPH6 523 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 CUL5Q93034 780 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 HTATIP2Q9BUP3 242 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 BACH2Q9BYV9 841 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 UBIAD1Q9Y5Z9 338 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 MRVI1Q9Y6F6 885 aa11.26□□□□□ -0.61
GTF3C1-212ENST00000570129 CCDC196A0A1B0GTZ2 297 aa11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 A6NJR5 290 aa11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 FAM86B1E9PN63 330 aa11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 FAM86B2P0C5J1 330 aa11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 ZNF286BP0CG31 522 aa11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 EPHB4P54760 987 aa11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 ZNF200P98182 395 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 PURAQ00577 322 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 FAAP100Q0VG06 881 aa11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 TTLL4Q14679 1199 aa11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 SNX17Q15036 470 aa11.25□□□□□ -0.61
GTF3C1-212ENST00000570129 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms