RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 PTMSP20962 102 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 ADCY7P51828 1080 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 SKOR1P84550 965 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 ATL3Q6DD88 541 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 GALNT17Q6IS24 598 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 FBXO11Q86XK2 927 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 ERO1BQ86YB8 467 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 OCSTAMPQ9BR26 566 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 AMNQ9BXJ7 453 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 C6orf50Q9HD87 102 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 TMOD4Q9NZQ9 345 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 CFAP45Q9UL16 551 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 PCDHA6Q9UN73 950 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 PCDHA8Q9Y5H6 950 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 GNA11P29992 359 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 NASPP49321 788 aaPredicted RBP11.42□□□□□ -0.58
GDE1-205ENST00000569899 SF3A1Q15459 793 aaKnown RBP11.42□□□□□ -0.58
GDE1-205ENST00000569899 UBE2SQ16763 222 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 LDLRAD1Q5T700 205 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 ANO1Q5XXA6 986 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 REXO1Q8N1G1 1221 aaKnown RBP11.42□□□□□ -0.58
GDE1-205ENST00000569899 GPT2Q8TD30 523 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 FOXJ1Q92949 421 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 OPTNQ96CV9 577 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 PRKD2Q9BZL6 878 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 TMEM260Q9NX78 707 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 RTEL1Q9NZ71 1219 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 PPP1R9AQ9ULJ8 1098 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 PCDHA1Q9Y5I3 950 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 TRAK2O60296 914 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 CELF2O95319 508 aaKnown RBP11.42□□□□□ -0.58
GDE1-205ENST00000569899 YEATS4O95619 227 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 FBXO45P0C2W1 286 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 ATP2B1P20020 1258 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 PPATQ06203 517 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 PPIL2Q13356 520 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 STK38Q15208 465 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 RILPL1Q5EBL4 403 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 TREML2Q5T2D2 321 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 LINC00301Q8NCQ3 95 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 WNK4Q96J92 1243 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 PGBD1Q96JS3 809 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 GBA2Q9HCG7 927 aaPredicted RBP11.42□□□□□ -0.58
GDE1-205ENST00000569899 RIC8AQ9NPQ8 531 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 RCOR1Q9UKL0 485 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 PCDHB6Q9Y5E3 794 aa11.42□□□□□ -0.58
GDE1-205ENST00000569899 LCTP09848 1927 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
GDE1-205ENST00000569899 CCDC194A0A1B0GVG4 234 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 OPLAHO14841 1288 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 PTK2Q05397 1052 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 PTPAQ15257 358 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 TTC38Q5R3I4 469 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 JAKMIP3Q5VZ66 844 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 SPRYD7Q5W111 196 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 GADL1Q6ZQY3 521 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
GDE1-205ENST00000569899 PRPF38AQ8NAV1 312 aaKnown RBP11.41□□□□□ -0.58
GDE1-205ENST00000569899 BICD2Q8TD16 824 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 CUL5Q93034 780 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 ATG4CQ96DT6 458 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 BIN2Q9UBW5 565 aaPredicted RBP11.41□□□□□ -0.58
GDE1-205ENST00000569899 NOL7Q9UMY1 257 aaKnown RBP11.41□□□□□ -0.58
GDE1-205ENST00000569899 KCNH4Q9UQ05 1017 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 GPSM3Q9Y4H4 160 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 DDX49Q9Y6V7 483 aaKnown RBP11.41□□□□□ -0.58
GDE1-205ENST00000569899 ZNF536O15090 1300 aa11.41□□□□□ -0.58
GDE1-205ENST00000569899 WNT7BP56706 349 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 UBE2HP62256 183 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 VAC14Q08AM6 782 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 INF2Q27J81 1249 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 KRT25Q7Z3Z0 450 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 SH3RF1Q7Z6J0 888 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 PSTPIP2Q9H939 334 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 SLC38A10Q9HBR0 1119 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 CCPG1Q9ULG6 757 aa11.4□□□□□ -0.58
GDE1-205ENST00000569899 USP17L15C9J2P7 530 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 USP17L13C9JLJ4 530 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 USP17L11C9JVI0 530 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 USP17L18D6R9N7 530 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 USP17L22D6RA61 530 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 USP17L17D6RBQ6 530 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 USP17L19D6RCP7 530 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 USP17L20D6RJB6 530 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 SPTLC2O15270 562 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 ICAM1P05362 532 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 MARCKSP29966 332 aaPredicted RBP11.39□□□□□ -0.59
GDE1-205ENST00000569899 FKBP1BP68106 108 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 USP17L24Q0WX57 530 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 NR1H3Q13133 447 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 NONOQ15233 471 aaKnown RBP eCLIP11.39□□□□□ -0.59
GDE1-205ENST00000569899 KLHL40Q2TBA0 621 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 USP17L6PQ6QN14 398 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 CATSPERGQ6ZRH7 1159 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 CPXCR1Q8N123 301 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 KCNG4Q8TDN1 519 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 AGBL1Q96MI9 1066 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 ARHGAP9Q9BRR9 750 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms