RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 LOC102724159A0A0B4J2E5 919 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 VPS37CA5D8V6 355 aaPredicted RBP18.3■□□□□ 0.52
USB1-215ENST00000569252 OPLAHO14841 1288 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 COBLO75128 1261 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 CNTN2Q02246 1040 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 PDE4DQ08499 809 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 PWP2Q15269 919 aaKnown RBP18.3■□□□□ 0.52
USB1-215ENST00000569252 ZNF792Q3KQV3 632 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 KRT25Q7Z3Z0 450 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 ZNF467Q7Z7K2 595 aaPredicted RBP18.3■□□□□ 0.52
USB1-215ENST00000569252 FAM133AQ8N9E0 248 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 DAGLBQ8NCG7 672 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 TAAR1Q96RJ0 339 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 IWS1Q96ST2 819 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 UBE2OQ9C0C9 1292 aaKnown RBP18.3■□□□□ 0.52
USB1-215ENST00000569252 GJB4Q9NTQ9 266 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 FLRT1Q9NZU1 646 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 EYSQ5T1H1 3165 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 FRMPD3Q5JV73 1810 aa18.3■□□□□ 0.52
USB1-215ENST00000569252 HOXC6P09630 235 aa18.29■□□□□ 0.52
USB1-215ENST00000569252 BMP8BP34820 402 aa18.29■□□□□ 0.52
USB1-215ENST00000569252 ZNF76P36508 570 aa18.29■□□□□ 0.52
USB1-215ENST00000569252 MFSD14CQ5VZR4 134 aa18.29■□□□□ 0.52
USB1-215ENST00000569252 DIS3L2Q8IYB7 885 aaKnown RBP18.29■□□□□ 0.52
USB1-215ENST00000569252 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
USB1-215ENST00000569252 ANKLE1Q8NAG6 615 aa18.29■□□□□ 0.52
USB1-215ENST00000569252 USP6NLQ92738 828 aa18.29■□□□□ 0.52
USB1-215ENST00000569252 FAM161BQ96MY7 647 aa18.29■□□□□ 0.52
USB1-215ENST00000569252 FOXP1Q9H334 677 aaPredicted RBP18.29■□□□□ 0.52
USB1-215ENST00000569252 VCANP13611 3396 aa18.29■□□□□ 0.52
USB1-215ENST00000569252 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
USB1-215ENST00000569252 EIF2AK2P19525 551 aaKnown RBP18.28■□□□□ 0.52
USB1-215ENST00000569252 SYT1P21579 422 aa18.28■□□□□ 0.52
USB1-215ENST00000569252 STXBP2Q15833 593 aa18.28■□□□□ 0.52
USB1-215ENST00000569252 LHX8Q68G74 356 aa18.28■□□□□ 0.52
USB1-215ENST00000569252 TDHQ8IZJ6 230 aa18.28■□□□□ 0.52
USB1-215ENST00000569252 MAML3Q96JK9 1138 aa18.28■□□□□ 0.52
USB1-215ENST00000569252 PXMP2Q9NR77 195 aa18.28■□□□□ 0.52
USB1-215ENST00000569252 TMEM260Q9NX78 707 aa18.28■□□□□ 0.52
USB1-215ENST00000569252 SOWAHBA6NEL2 793 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 BTBD18B2RXH4 712 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 STX6O43752 255 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 COL6A1P12109 1028 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 CCND2P30279 289 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 CLK2P49760 499 aaKnown RBP18.27■□□□□ 0.52
USB1-215ENST00000569252 ALDH5A1P51649 535 aaPredicted RBP18.27■□□□□ 0.52
USB1-215ENST00000569252 NONOQ15233 471 aaKnown RBP eCLIP18.27■□□□□ 0.52
USB1-215ENST00000569252 OLFML2BQ68BL8 750 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 XRRA1Q6P2D8 792 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 NPLOC4Q8TAT6 608 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 PURBQ96QR8 312 aaKnown RBP18.27■□□□□ 0.52
USB1-215ENST00000569252 TINF2Q9BSI4 451 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 ANO3Q9BYT9 981 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 MTMR10Q9NXD2 777 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.52
USB1-215ENST00000569252 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
USB1-215ENST00000569252 RASGRP4Q8TDF6 673 aa18.26■□□□□ 0.51
USB1-215ENST00000569252 COL20A1Q9P218 1284 aa18.26■□□□□ 0.51
USB1-215ENST00000569252 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
USB1-215ENST00000569252 SYNGAP1Q96PV0 1343 aa18.25■□□□□ 0.51
USB1-215ENST00000569252 EIF3JO75822 258 aaKnown RBP18.25■□□□□ 0.51
USB1-215ENST00000569252 STAM2O75886 525 aa18.25■□□□□ 0.51
USB1-215ENST00000569252 NR3C2P08235 984 aa18.25■□□□□ 0.51
USB1-215ENST00000569252 USP11P51784 963 aa18.25■□□□□ 0.51
USB1-215ENST00000569252 ATN1P54259 1190 aaPredicted RBP18.25■□□□□ 0.51
USB1-215ENST00000569252 PGM5Q15124 567 aa18.25■□□□□ 0.51
USB1-215ENST00000569252 MAMDC4Q6UXC1 1216 aa18.25■□□□□ 0.51
USB1-215ENST00000569252 OXER1Q8TDS5 423 aa18.25■□□□□ 0.51
USB1-215ENST00000569252 PGBD1Q96JS3 809 aa18.25■□□□□ 0.51
USB1-215ENST00000569252 IPO9Q96P70 1041 aaKnown RBP18.25■□□□□ 0.51
USB1-215ENST00000569252 NAP1L4Q99733 375 aaKnown RBP18.25■□□□□ 0.51
USB1-215ENST00000569252 CDH23Q9H251 3354 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 SMCHD1A6NHR9 2005 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 NR5A1Q13285 461 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 LRIT3Q3SXY7 679 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 PCNX4Q63HM2 1172 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 ARMCX2Q7L311 632 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 NLRX1Q86UT6 975 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 VSIG10LQ86VR7 867 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 NOSTRINQ8IVI9 506 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 TBCKQ8TEA7 893 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 PDCD2LQ9BRP1 358 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 ABHD16BQ9H3Z7 469 aa18.24■□□□□ 0.51
USB1-215ENST00000569252 ZSCAN16Q9H4T2 348 aaPredicted RBP18.24■□□□□ 0.51
USB1-215ENST00000569252 M0R2N6 131 aa18.23■□□□□ 0.51
USB1-215ENST00000569252 SREBF1P36956 1147 aa18.23■□□□□ 0.51
USB1-215ENST00000569252 ARHGAP4P98171 946 aa18.23■□□□□ 0.51
USB1-215ENST00000569252 GNPTABQ3T906 1256 aa18.23■□□□□ 0.51
USB1-215ENST00000569252 TRPV1Q8NER1 839 aa18.23■□□□□ 0.51
USB1-215ENST00000569252 SENP6Q9GZR1 1112 aaPredicted RBP18.23■□□□□ 0.51
USB1-215ENST00000569252 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.23■□□□□ 0.51
USB1-215ENST00000569252 MARCH6O60337 910 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 U2AF2P26368 475 aaKnown RBP eCLIP18.22■□□□□ 0.51
USB1-215ENST00000569252 CYP2C19P33261 490 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 NUCB2P80303 420 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 NPY5RQ15761 445 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 INF2Q27J81 1249 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 KCNV1Q6PIU1 500 aa18.22■□□□□ 0.51
USB1-215ENST00000569252 BRAPQ7Z569 592 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms