RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 DBX1A6NMT0 343 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 NPIPB6E9PJ23 425 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 F8W031 263 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 ABLIM1O14639 778 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 PRODHO43272 600 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 MSCO60682 206 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 NTRK1P04629 796 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 FGFR1P11362 822 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 LTBRP36941 435 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 BCL6P41182 706 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 NCKAP1LP55160 1127 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 ZNF200P98182 395 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 MAP4K2Q12851 820 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 KCNAB2Q13303 367 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 SSPNQ14714 243 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 NTRK3Q16288 839 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 MTERF2Q49AM1 385 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 FOXB2Q5VYV0 432 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 WWC2Q6AWC2 1192 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 ZC3H14Q6PJT7 736 aaKnown RBP5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 LDHDQ86WU2 507 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 USP33Q8TEY7 942 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 KCTD13Q8WZ19 329 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 ZNF669Q96BR6 464 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 DEPDC7Q96QD5 511 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 PCDHA5Q9Y5H7 936 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 TIMM13Q9Y5L4 95 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 NPFFR2Q9Y5X5 522 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 ADCY10Q96PN6 1610 aa5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 IRS2Q9Y4H2 1338 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 TRAV20A0A0B4J274 112 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 BLACEA4D250 179 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 TCAF2A6NFQ2 919 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 C22orf46C9J442 243 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 N4BP3O15049 544 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 PABPC1P11940 636 aaKnown RBP5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 FBLN1P23142 703 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 CFPP27918 469 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 RPL11P62913 178 aaKnown RBP5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 JAG1P78504 1218 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 PRR5P85299 388 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 SSRP1Q08945 709 aaKnown RBP5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 KCNA10Q16322 511 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 IQCEQ6IPM2 695 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 NSMFQ6X4W1 530 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 C1QL4Q86Z23 238 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 KRTAP1-3Q8IUG1 177 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 IGDCC3Q8IVU1 814 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 LRRC47Q8N1G4 583 aaKnown RBP5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 EPB41L4AQ9HCS5 686 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 PCDHA2Q9Y5H9 948 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 ABCA10Q8WWZ4 1543 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 ABCC10Q5T3U5 1492 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 NUP160Q12769 1436 aa5.06□□□□□ -1.6
HMGB1P6-201ENST00000569046 CUL7Q14999 1698 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 HECW2Q9P2P5 1572 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 IRS4O14654 1257 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 FAM153BP0C7A2 387 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 LINC00310P59036 64 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 TMEM62Q0P6H9 643 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 OLFML2BQ68BL8 750 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 KCNT2Q6UVM3 1135 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 USP53Q70EK8 1073 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 CEP68Q76N32 757 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 CABP7Q86V35 215 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 ANKLE2Q86XL3 938 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 TMEFF1Q8IYR6 380 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 Q8N1Y9 231 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 NETO2Q8NC67 525 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 PANK1Q8TE04 598 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 MZB1Q8WU39 189 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 CDIP1Q9H305 208 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 PPARGC1AQ9UBK2 798 aaKnown RBP5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 DBR1Q9UK59 544 aaKnown RBP5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 X6R8D5 127 aa5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 PPRC1Q5VV67 1664 aaKnown RBP5.05□□□□□ -1.6
HMGB1P6-201ENST00000569046 KDM2BQ8NHM5 1336 aa5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 SGSM2O43147 1006 aa5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 IGFBP6P24592 240 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 LSAMPQ13449 338 aa5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 FAM209AQ5JX71 171 aa5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 ZBTB38Q8NAP3 1195 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 EXOC2Q96KP1 924 aa5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 SRPK1Q96SB4 655 aaKnown RBP5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 DNAJC7Q99615 494 aa5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 PHF20Q9BVI0 1012 aa5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 ADGRL1O94910 1474 aa5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 ASXL2Q76L83 1435 aa5.04□□□□□ -1.6
HMGB1P6-201ENST00000569046 BUB1BO60566 1050 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 ATF2P15336 505 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 PI3P19957 117 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 MC3RP41968 323 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 SOGA3Q5TF21 947 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 LRP10Q7Z4F1 713 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 LRRC56Q8IYG6 542 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 MKL1Q969V6 931 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 TSPAN17Q96FV3 270 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 TRMT2BQ96GJ1 504 aaKnown RBP5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 PEX11GQ96HA9 241 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 TMEM169Q96HH4 297 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms