RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 UBE2SQ16763 222 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 NDST4Q9H3R1 872 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 KRT14P02533 472 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 PICALMQ13492 652 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 MEA1Q16626 185 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 CACNA2D4Q7Z3S7 1137 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 SPATA4Q8NEY3 305 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 MTMR8Q96EF0 704 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.01■□□□□ 0.63
VAC14-210ENST00000568548 FAM107BQ9H098 131 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 CENPHQ9H3R5 247 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 MED4Q9NPJ6 270 aa19.01■□□□□ 0.63
VAC14-210ENST00000568548 NPHP3-ACAD11A0A0J9YXS1 232 aa19■□□□□ 0.63
VAC14-210ENST00000568548 ZEB2O60315 1214 aa19■□□□□ 0.63
VAC14-210ENST00000568548 MAGEA1P43355 309 aa19■□□□□ 0.63
VAC14-210ENST00000568548 TNNI2P48788 182 aa19■□□□□ 0.63
VAC14-210ENST00000568548 VAV2P52735 878 aa19■□□□□ 0.63
VAC14-210ENST00000568548 TTC31Q49AM3 519 aaPredicted RBP19■□□□□ 0.63
VAC14-210ENST00000568548 CNBD1Q8NA66 436 aa19■□□□□ 0.63
VAC14-210ENST00000568548 FAM76AQ8TAV0 307 aa19■□□□□ 0.63
VAC14-210ENST00000568548 CDK5RAP3Q96JB5 506 aa19■□□□□ 0.63
VAC14-210ENST00000568548 RBM12Q9NTZ6 932 aaKnown RBP19■□□□□ 0.63
VAC14-210ENST00000568548 GRM4Q14833 912 aa19■□□□□ 0.63
VAC14-210ENST00000568548 NONOQ15233 471 aaKnown RBP eCLIP19■□□□□ 0.639e-6■■■□□ 19
VAC14-210ENST00000568548 SNX12Q9UMY4 172 aa19■□□□□ 0.63
VAC14-210ENST00000568548 TIAM2Q8IVF5 1701 aa18.99■□□□□ 0.63
VAC14-210ENST00000568548 DHTKD1Q96HY7 919 aaPredicted RBP18.99■□□□□ 0.63
VAC14-210ENST00000568548 EYA3Q99504 573 aa18.99■□□□□ 0.63
VAC14-210ENST00000568548 RASA1P20936 1047 aa18.99■□□□□ 0.63
VAC14-210ENST00000568548 IBSPP21815 317 aaPredicted RBP18.99■□□□□ 0.63
VAC14-210ENST00000568548 SLC16A2P36021 539 aa18.99■□□□□ 0.63
VAC14-210ENST00000568548 KCNB1Q14721 858 aa18.99■□□□□ 0.63
VAC14-210ENST00000568548 SOGA3Q5TF21 947 aa18.99■□□□□ 0.63
VAC14-210ENST00000568548 TMED8Q6PL24 325 aaPredicted RBP18.99■□□□□ 0.63
VAC14-210ENST00000568548 CEP95Q96GE4 821 aa18.99■□□□□ 0.63
VAC14-210ENST00000568548 OSBPL9Q96SU4 736 aa18.99■□□□□ 0.63
VAC14-210ENST00000568548 CCSER1Q9C0I3 900 aa18.99■□□□□ 0.63
VAC14-210ENST00000568548 MARCH6O60337 910 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 FAM153BP0C7A2 387 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 ECM1Q16610 540 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 FAM153CQ494X1 144 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 VWA3BQ502W6 1294 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 PYM1Q9BRP8 204 aaKnown RBP18.98■□□□□ 0.63
VAC14-210ENST00000568548 FAM153AQ9UHL3 310 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 CACNA1SQ13698 1873 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
VAC14-210ENST00000568548 TACC1O75410 805 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 TRIM37O94972 964 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 GNGT1P63211 74 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 CKAP4Q07065 602 aaKnown RBP18.98■□□□□ 0.63
VAC14-210ENST00000568548 SF3A3Q12874 501 aaKnown RBP eCLIP18.98■□□□□ 0.63
VAC14-210ENST00000568548 NEK8Q86SG6 692 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 DGKHQ86XP1 1220 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 BCAS4Q8TDM0 211 aa18.98■□□□□ 0.63
VAC14-210ENST00000568548 GRB10Q13322 594 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 SV2BQ7L1I2 683 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 CCDC47Q96A33 483 aaKnown RBP18.97■□□□□ 0.63
VAC14-210ENST00000568548 CALML4Q96GE6 196 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 RUFY1Q96T51 708 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 PACSIN1Q9BY11 444 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 BLOC1S4Q9NUP1 217 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 NFU1Q9UMS0 254 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 CARSP49589 748 aaKnown RBP18.97■□□□□ 0.63
VAC14-210ENST00000568548 PDCLQ13371 301 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 CCDC70Q6NSX1 233 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 TRAF5O00463 557 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 USO1O60763 962 aaKnown RBP18.97■□□□□ 0.63
VAC14-210ENST00000568548 ADRA2BP18089 450 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 SNX29Q8TEQ0 813 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 SH2D4AQ9H788 454 aa18.97■□□□□ 0.63
VAC14-210ENST00000568548 SEC63Q9UGP8 760 aaKnown RBP18.97■□□□□ 0.63
VAC14-210ENST00000568548 BICDL2A1A5D9 508 aa18.96■□□□□ 0.63
VAC14-210ENST00000568548 CDK8P49336 464 aa18.96■□□□□ 0.63
VAC14-210ENST00000568548 CALCRLQ16602 461 aa18.96■□□□□ 0.63
VAC14-210ENST00000568548 DDX12PQ92771 950 aa18.96■□□□□ 0.63
VAC14-210ENST00000568548 PALM3A6NDB9 673 aaPredicted RBP18.96■□□□□ 0.63
VAC14-210ENST00000568548 GLI1P08151 1106 aa18.96■□□□□ 0.63
VAC14-210ENST00000568548 POLR2FP61218 127 aaKnown RBP18.96■□□□□ 0.63
VAC14-210ENST00000568548 GRAPQ13588 217 aa18.96■□□□□ 0.63
VAC14-210ENST00000568548 PRR5LQ6MZQ0 368 aa18.96■□□□□ 0.63
VAC14-210ENST00000568548 REXO1Q8N1G1 1221 aaKnown RBP18.96■□□□□ 0.63
VAC14-210ENST00000568548 GRAPLQ8TC17 118 aaPredicted RBP18.96■□□□□ 0.63
VAC14-210ENST00000568548 PNMA5Q96PV4 448 aa18.96■□□□□ 0.63
VAC14-210ENST00000568548 PPFIA4O75335 1185 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 GYS1P13807 737 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 IRAK1P51617 712 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 GUCY2DQ02846 1103 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 EHHADHQ08426 723 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 KRT27Q7Z3Y8 459 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 KLHL7Q8IXQ5 586 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 BCAS3Q9H6U6 928 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 PLAGL2Q9UPG8 496 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 SIK3Q9Y2K2 1263 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 JRKLQ9Y4A0 524 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 BTDP43251 543 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 EHBP1Q8NDI1 1231 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 C6orf50Q9HD87 102 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 ADAMTS1Q9UHI8 967 aa18.95■□□□□ 0.62
VAC14-210ENST00000568548 TAL1P17542 331 aaPredicted RBP18.94■□□□□ 0.62
VAC14-210ENST00000568548 CCDC40Q4G0X9 1142 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms