RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 VTA1Q9NP79 307 aa16.29■□□□□ 0.2
NEIL1-219ENST00000568519 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.29■□□□□ 0.2
NEIL1-219ENST00000568519 COL20A1Q9P218 1284 aa16.29■□□□□ 0.2
NEIL1-219ENST00000568519 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
NEIL1-219ENST00000568519 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
NEIL1-219ENST00000568519 FDPSP14324 419 aaKnown RBP16.28■□□□□ 0.2
NEIL1-219ENST00000568519 CLK2P49760 499 aaKnown RBP16.28■□□□□ 0.2
NEIL1-219ENST00000568519 CUL4AQ13619 759 aa16.28■□□□□ 0.2
NEIL1-219ENST00000568519 ANKLE1Q8NAG6 615 aa16.28■□□□□ 0.2
NEIL1-219ENST00000568519 PXMP2Q9NR77 195 aa16.28■□□□□ 0.2
NEIL1-219ENST00000568519 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.28■□□□□ 0.2
NEIL1-219ENST00000568519 SPDYE3A6NKU9 549 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 SEPT4O43236 478 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 HOXA13P31271 388 aaPredicted RBP16.27■□□□□ 0.2
NEIL1-219ENST00000568519 CYP2C19P33261 490 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 PDE4DQ08499 809 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 LRRC26Q2I0M4 334 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 ARHGEF16Q5VV41 709 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 USP17L6PQ6QN14 398 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 REXO1Q8N1G1 1221 aaKnown RBP16.27■□□□□ 0.2
NEIL1-219ENST00000568519 INTS4Q96HW7 963 aaKnown RBP16.27■□□□□ 0.2
NEIL1-219ENST00000568519 TAAR1Q96RJ0 339 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 ALG1Q9BT22 464 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 KATNBL1Q9H079 304 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 OGDHLQ9ULD0 1010 aa16.27■□□□□ 0.2
NEIL1-219ENST00000568519 MCM3APO60318 1980 aa16.27■□□□□ 0.19
NEIL1-219ENST00000568519 FRMPD3Q5JV73 1810 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 K7ELQ4 463 aaPredicted RBP16.26■□□□□ 0.19
NEIL1-219ENST00000568519 EIF3JO75822 258 aaKnown RBP16.26■□□□□ 0.19
NEIL1-219ENST00000568519 NR3C2P08235 984 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 ZNF865P0CJ78 1059 aaPredicted RBP16.26■□□□□ 0.19
NEIL1-219ENST00000568519 ACVR2BQ13705 512 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 PGM5Q15124 567 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 STXBP2Q15833 593 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 PCNX4Q63HM2 1172 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 PHF20Q9BVI0 1012 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 VPS54Q9P1Q0 977 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 PCDHA4Q9UN74 947 aa16.26■□□□□ 0.19
NEIL1-219ENST00000568519 RBM47A0AV96 593 aaKnown RBP16.25■□□□□ 0.19
NEIL1-219ENST00000568519 JAK2O60674 1132 aa16.25■□□□□ 0.19
NEIL1-219ENST00000568519 AKR1A1P14550 325 aa16.25■□□□□ 0.19
NEIL1-219ENST00000568519 CCND3P30281 292 aaPredicted RBP16.25■□□□□ 0.19
NEIL1-219ENST00000568519 NLRP5P59047 1200 aa16.25■□□□□ 0.19
NEIL1-219ENST00000568519 KCNV1Q6PIU1 500 aa16.25■□□□□ 0.19
NEIL1-219ENST00000568519 KIAA1217Q5T5P2 1943 aa16.25■□□□□ 0.19
NEIL1-219ENST00000568519 CDH23Q9H251 3354 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 COL6A1P12109 1028 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 CCND2P30279 289 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 SREBF1P36956 1147 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 TRIM29Q14134 588 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 IQSEC1Q6DN90 963 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 FCHSD1Q86WN1 690 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 BLIDQ8IZY5 108 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 PURBQ96QR8 312 aaKnown RBP16.24■□□□□ 0.19
NEIL1-219ENST00000568519 BRMS1Q9HCU9 246 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 FAM184BQ9ULE4 1060 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 PCDHA6Q9UN73 950 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 PCDHA8Q9Y5H6 950 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 TTC28Q96AY4 2481 aa16.24■□□□□ 0.19
NEIL1-219ENST00000568519 M0R2N6 131 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 NKRFO15226 690 aaKnown RBP eCLIP16.23■□□□□ 0.19
NEIL1-219ENST00000568519 MAFGO15525 162 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 TGFB3P10600 412 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 EIF2AK2P19525 551 aaKnown RBP16.23■□□□□ 0.19
NEIL1-219ENST00000568519 NKX3-2P78367 333 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 NPY5RQ15761 445 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 HSCBQ8IWL3 235 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 FAM184AQ8NB25 1140 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 TRPV1Q8NER1 839 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 SCFD2Q8WU76 684 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 CRYGNQ8WXF5 182 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 INPP4AQ96PE3 977 aaPredicted RBP16.23■□□□□ 0.19
NEIL1-219ENST00000568519 ANO3Q9BYT9 981 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 DDX20Q9UHI6 824 aaKnown RBP16.23■□□□□ 0.19
NEIL1-219ENST00000568519 Q9Y3F1 56 aa16.23■□□□□ 0.19
NEIL1-219ENST00000568519 PPFIA3O75145 1194 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 DUSP11O75319 330 aaKnown RBP16.22■□□□□ 0.19
NEIL1-219ENST00000568519 MMP1P03956 469 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 CYP3A4P08684 503 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 UBE2SQ16763 222 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 GNPTABQ3T906 1256 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 LHX8Q68G74 356 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 TAPT1Q6NXT6 567 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 KRT25Q7Z3Z0 450 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 FBXO18Q8NFZ0 1043 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 CDHR1Q96JP9 859 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 AIFM3Q96NN9 605 aa16.22■□□□□ 0.19
NEIL1-219ENST00000568519 ZHX1Q9UKY1 873 aaPredicted RBP16.22■□□□□ 0.19
NEIL1-219ENST00000568519 PDIA4P13667 645 aaKnown RBP16.21■□□□□ 0.19
NEIL1-219ENST00000568519 ICAM3P32942 547 aa16.21■□□□□ 0.19
NEIL1-219ENST00000568519 TTLL4Q14679 1199 aa16.21■□□□□ 0.19
NEIL1-219ENST00000568519 CCDC144BQ3MJ40 725 aa16.21■□□□□ 0.19
NEIL1-219ENST00000568519 DUSP28Q4G0W2 176 aa16.21■□□□□ 0.19
NEIL1-219ENST00000568519 NIPA1Q7RTP0 329 aa16.21■□□□□ 0.19
NEIL1-219ENST00000568519 GPRASP2Q96D09 838 aa16.21■□□□□ 0.19
NEIL1-219ENST00000568519 C8orf76Q96K31 380 aa16.21■□□□□ 0.19
NEIL1-219ENST00000568519 SMC3Q9UQE7 1217 aa16.21■□□□□ 0.19
NEIL1-219ENST00000568519 LTBP2Q14767 1821 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms