RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 EMID1Q96A84 441 aaPredicted RBP21.94■■□□□ 1.1
SPSB3-210ENST00000568416 LSG1Q9H089 658 aaKnown RBP21.94■■□□□ 1.1
SPSB3-210ENST00000568416 SCN10AQ9Y5Y9 1956 aa21.94■■□□□ 1.1
SPSB3-210ENST00000568416 PNMA6FA0A0J9YX94 578 aa21.93■■□□□ 1.1
SPSB3-210ENST00000568416 PFKMP08237 780 aa21.93■■□□□ 1.1
SPSB3-210ENST00000568416 HOXA13P31271 388 aaPredicted RBP21.93■■□□□ 1.1
SPSB3-210ENST00000568416 PGM5Q15124 567 aa21.93■■□□□ 1.1
SPSB3-210ENST00000568416 SESTD1Q86VW0 696 aa21.93■■□□□ 1.1
SPSB3-210ENST00000568416 KAT2BQ92831 832 aa21.93■■□□□ 1.1
SPSB3-210ENST00000568416 MAP3K14Q99558 947 aa21.93■■□□□ 1.1
SPSB3-210ENST00000568416 MTA3Q9BTC8 594 aa21.93■■□□□ 1.1
SPSB3-210ENST00000568416 LY9Q9HBG7 655 aa21.93■■□□□ 1.1
SPSB3-210ENST00000568416 MRVI1Q9Y6F6 885 aa21.93■■□□□ 1.1
SPSB3-210ENST00000568416 GCOM1H8Y6P7 765 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-210ENST00000568416 PITPNM1O00562 1244 aa21.92■■□□□ 1.1
SPSB3-210ENST00000568416 POLR2MP0CAP2 368 aa21.92■■□□□ 1.1
SPSB3-210ENST00000568416 MYCLP12524 364 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-210ENST00000568416 CASTP20810 708 aaKnown RBP21.92■■□□□ 1.1
SPSB3-210ENST00000568416 RAB30Q15771 203 aa21.92■■□□□ 1.1
SPSB3-210ENST00000568416 VSIG10LQ86VR7 867 aa21.92■■□□□ 1.1
SPSB3-210ENST00000568416 LAMC2Q13753 1193 aa21.91■■□□□ 1.1
SPSB3-210ENST00000568416 DGKDQ16760 1214 aa21.91■■□□□ 1.1
SPSB3-210ENST00000568416 IL31RAQ8NI17 732 aa21.91■■□□□ 1.1
SPSB3-210ENST00000568416 CTAGE1Q96RT6 745 aa21.91■■□□□ 1.1
SPSB3-210ENST00000568416 ESYT1Q9BSJ8 1104 aa21.91■■□□□ 1.1
SPSB3-210ENST00000568416 MSRAQ9UJ68 235 aa21.91■■□□□ 1.1
SPSB3-210ENST00000568416 LAMA2P24043 3122 aaKnown RBP21.91■■□□□ 1.1
SPSB3-210ENST00000568416 PRC1O43663 620 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 DDAH1O94760 285 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 IQCF3P0C7M6 154 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 RFC2P35250 354 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 CHMP4BP1P59074 171 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 KCNV1Q6PIU1 500 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 DHX37Q8IY37 1157 aaKnown RBP21.9■■□□□ 1.1
SPSB3-210ENST00000568416 ZNF654Q8IZM8 581 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 RETREG2Q8NC44 543 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 PPTC7Q8NI37 304 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 SPZ1Q9BXG8 430 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 SLC4A7Q9Y6M7 1214 aa21.9■■□□□ 1.1
SPSB3-210ENST00000568416 SLC27A2O14975 620 aa21.89■■□□□ 1.09
SPSB3-210ENST00000568416 HOXD8P13378 290 aaPredicted RBP21.89■■□□□ 1.09
SPSB3-210ENST00000568416 BFSP2Q13515 415 aa21.89■■□□□ 1.09
SPSB3-210ENST00000568416 COL9A3Q14050 684 aaPredicted RBP21.89■■□□□ 1.09
SPSB3-210ENST00000568416 PTGISQ16647 500 aa21.89■■□□□ 1.09
SPSB3-210ENST00000568416 GDF6Q6KF10 455 aaPredicted RBP21.89■■□□□ 1.09
SPSB3-210ENST00000568416 CASC1Q6TDU7 716 aa21.89■■□□□ 1.09
SPSB3-210ENST00000568416 DEFB128Q7Z7B8 93 aa21.89■■□□□ 1.09
SPSB3-210ENST00000568416 FCHSD1Q86WN1 690 aa21.89■■□□□ 1.09
SPSB3-210ENST00000568416 MYL10Q9BUA6 226 aa21.89■■□□□ 1.09
SPSB3-210ENST00000568416 NKX2-4Q9H2Z4 354 aa21.89■■□□□ 1.09
SPSB3-210ENST00000568416 NOD1Q9Y239 953 aa21.89■■□□□ 1.09
SPSB3-210ENST00000568416 YBX2Q9Y2T7 364 aaKnown RBP21.89■■□□□ 1.09
SPSB3-210ENST00000568416 MYH6P13533 1939 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 FRMPD4Q14CM0 1322 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 ZBBXA8MT70 800 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 HAS3O00219 553 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 SH2B2O14492 632 aaPredicted RBP21.88■■□□□ 1.09
SPSB3-210ENST00000568416 F2P00734 622 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 SMARCA1P28370 1054 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 CCND2P30279 289 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 MCM5P33992 734 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 PSEN2P49810 448 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 NECTIN1Q15223 517 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 MYSM1Q5VVJ2 828 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 CTCFLQ8NI51 663 aaPredicted RBP21.88■■□□□ 1.09
SPSB3-210ENST00000568416 TMEM87BQ96K49 555 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 KATNAL1Q9BW62 490 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 GTF2IRD1Q9UHL9 959 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 KIAA1217Q5T5P2 1943 aa21.88■■□□□ 1.09
SPSB3-210ENST00000568416 TGFB3P10600 412 aa21.87■■□□□ 1.09
SPSB3-210ENST00000568416 KIF5BP33176 963 aa21.87■■□□□ 1.09
SPSB3-210ENST00000568416 SP2Q02086 613 aa21.87■■□□□ 1.09
SPSB3-210ENST00000568416 CELF3Q5SZQ8 465 aaKnown RBP21.87■■□□□ 1.09
SPSB3-210ENST00000568416 CREB3L3Q68CJ9 461 aa21.87■■□□□ 1.09
SPSB3-210ENST00000568416 TMTC2Q8N394 836 aa21.87■■□□□ 1.09
SPSB3-210ENST00000568416 CCDC155Q8N6L0 562 aa21.87■■□□□ 1.09
SPSB3-210ENST00000568416 CAGE1Q8TC20 777 aa21.87■■□□□ 1.09
SPSB3-210ENST00000568416 PIBF1Q8WXW3 757 aa21.87■■□□□ 1.09
SPSB3-210ENST00000568416 DHX38Q92620 1227 aaKnown RBP21.87■■□□□ 1.09
SPSB3-210ENST00000568416 ZFP91Q96JP5 570 aaPredicted RBP21.87■■□□□ 1.09
SPSB3-210ENST00000568416 HDAC6Q9UBN7 1215 aa21.87■■□□□ 1.09
SPSB3-210ENST00000568416 GGPS1O95749 300 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 ACTN1P12814 892 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 UBA1P22314 1058 aaKnown RBP21.86■■□□□ 1.09
SPSB3-210ENST00000568416 RABGGTBP53611 331 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 RBL2Q08999 1139 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 MFSD10Q14728 455 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 HSDL1Q3SXM5 330 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 GPKOWQ92917 476 aaPredicted RBP eCLIP21.86■■□□□ 1.09
SPSB3-210ENST00000568416 RRP36Q96EU6 259 aaKnown RBP21.86■■□□□ 1.09
SPSB3-210ENST00000568416 LZTS2Q9BRK4 669 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 ALG1Q9BT22 464 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 PRDM12Q9H4Q4 367 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 SLC28A3Q9HAS3 691 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 PCDHA11Q9Y5I1 949 aa21.86■■□□□ 1.09
SPSB3-210ENST00000568416 PPFIA4O75335 1185 aa21.85■■□□□ 1.09
SPSB3-210ENST00000568416 PLEKHA8P1O95397 391 aa21.85■■□□□ 1.09
SPSB3-210ENST00000568416 ZNF286BP0CG31 522 aa21.85■■□□□ 1.09
SPSB3-210ENST00000568416 ATP2A2P16615 1042 aaKnown RBP21.85■■□□□ 1.09
SPSB3-210ENST00000568416 LIFRP42702 1097 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms