RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 NEDD4P46934 1319 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 B4E1Z4 1266 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 RANBP6O60518 1105 aaKnown RBP9.12□□□□□ -0.95
SMG1-214ENST00000568038 CPB1P15086 417 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 NF2P35240 595 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
SMG1-214ENST00000568038 TRDNQ13061 729 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 ADCK5Q3MIX3 580 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 FAM47AQ5JRC9 791 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 DCAF15Q66K64 600 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 FAM35AQ86V20 835 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 ZNF444Q8N0Y2 327 aaPredicted RBP9.12□□□□□ -0.95
SMG1-214ENST00000568038 CMTR1Q8N1G2 835 aaKnown RBP9.12□□□□□ -0.95
SMG1-214ENST00000568038 HOOK2Q96ED9 719 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 JAKMIP1Q96N16 626 aaKnown RBP9.12□□□□□ -0.95
SMG1-214ENST00000568038 TBC1D32Q96NH3 1257 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 RNF41Q9H4P4 317 aaPredicted RBP9.12□□□□□ -0.95
SMG1-214ENST00000568038 EFCC1Q9HA90 598 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 SWAP70Q9UH65 585 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 HERC5Q9UII4 1024 aaKnown RBP9.12□□□□□ -0.95
SMG1-214ENST00000568038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMG1-214ENST00000568038 LAMB1P07942 1786 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 ROBO3Q96MS0 1386 aa9.12□□□□□ -0.95
SMG1-214ENST00000568038 RGS9O75916 674 aaPredicted RBP9.11□□□□□ -0.95
SMG1-214ENST00000568038 CPA1P15085 419 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 SHMT1P34896 483 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 RBM25P49756 843 aaKnown RBP9.11□□□□□ -0.95
SMG1-214ENST00000568038 KRT32Q14532 448 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 CERKLQ49MI3 558 aaPredicted RBP9.11□□□□□ -0.95
SMG1-214ENST00000568038 RALYLQ86SE5 291 aaKnown RBP9.11□□□□□ -0.95
SMG1-214ENST00000568038 METTL16Q86W50 562 aaKnown RBP9.11□□□□□ -0.95
SMG1-214ENST00000568038 SMC1BQ8NDV3 1235 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 NCOA7Q8NI08 942 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 MYO19Q96H55 970 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 NEK1Q96PY6 1258 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 ZNF341Q9BYN7 854 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 KRT23Q9C075 422 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 CNNM2Q9H8M5 875 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 ZNF287Q9HBT7 754 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 ZFATQ9P243 1243 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 ZMIZ1Q9ULJ6 1067 aa9.11□□□□□ -0.95
SMG1-214ENST00000568038 SIPA1L1O43166 1804 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 TSPY2A6NKD2 308 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 MPHOSPH10O00566 681 aaKnown RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 ORC4O43929 436 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 USP2O75604 605 aaPredicted RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 TOMM70O94826 608 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 CELF2O95319 508 aaKnown RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 FGRP09769 529 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 TSPY3P0CV98 308 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 TSPY8P0CW00 308 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 RARAP10276 462 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 PCP11498 1178 aaKnown RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 AKR1B1P15121 316 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 CASTP20810 708 aaKnown RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 PSMA5P28066 241 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 ANAPC15P60006 121 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 TFAP4Q01664 338 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 RRP1BQ14684 758 aaKnown RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 SHROOM1Q2M3G4 852 aaPredicted RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 COX20Q5RI15 118 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 TATDN1Q6P1N9 297 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 MOB2Q70IA6 237 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 CHST3Q7LGC8 479 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 ARMC9Q7Z3E5 817 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 DMRTC2Q8IXT2 367 aaPredicted RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 RGL4Q8IZJ4 473 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 ESR2Q92731 530 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 WRNIP1Q96S55 665 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 UPF3BQ9BZI7 483 aaKnown RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 ZMYND15Q9H091 742 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 SEMA6BQ9H3T3 888 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 ZSWIM5Q9P217 1185 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 NAGPAQ9UK23 515 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 ANGEL1Q9UNK9 670 aaKnown RBP9.1□□□□□ -0.95
SMG1-214ENST00000568038 SSC5DA1L4H1 1573 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 LAMA4Q16363 1823 aa9.1□□□□□ -0.95
SMG1-214ENST00000568038 UBE2Q2LH0YL09 131 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 OPLAHO14841 1288 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 NMT2O60551 498 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 GH2P01242 217 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 CAP2P40123 477 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 JAG1P78504 1218 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 ABCB5Q2M3G0 1257 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 BLOC1S2Q6QNY1 142 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 HFE2Q6ZVN8 426 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 CYB5R4Q7L1T6 521 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 DHX32Q7L7V1 743 aaKnown RBP9.09□□□□□ -0.95
SMG1-214ENST00000568038 TREML1Q86YW5 311 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 MB21D2Q8IYB1 491 aaPredicted RBP9.09□□□□□ -0.95
SMG1-214ENST00000568038 CCDC17Q96LX7 622 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 TCEANC2Q96MN5 208 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 KIF2CQ99661 725 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 ZKSCAN3Q9BRR0 538 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 MKNK1Q9BUB5 465 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 LRRC2Q9BYS8 371 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 CABP5Q9NP86 173 aa9.09□□□□□ -0.95
SMG1-214ENST00000568038 A0A0A0MRY4 1105 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 IFIT3O14879 490 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms