RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 NELFBQ8WX92 580 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 LRRC27Q9C0I9 530 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 PCDHA12Q9UN75 941 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 DDNO94850 711 aaPredicted RBP26.04■■□□□ 1.76
LINC00543-201ENST00000567234 TBX2Q13207 712 aaPredicted RBP26.04■■□□□ 1.76
LINC00543-201ENST00000567234 CDAN1Q8IWY9 1227 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 PNMA5Q96PV4 448 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 KCNMB3Q9NPA1 279 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 TBX3O15119 743 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 MARCH6O60337 910 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 SREBF1P36956 1147 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 ARHGAP4P98171 946 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 TMEM119Q4V9L6 283 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 HSP90AA4PQ58FG1 418 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 KIAA1755Q5JYT7 1200 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 SPECC1LQ69YQ0 1117 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 CNNM4Q6P4Q7 775 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 MIGA2Q7L4E1 593 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 SLFN12Q8IYM2 578 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 GPC2Q8N158 579 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 BLOC1S4Q9NUP1 217 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 GDAQ9Y2T3 454 aa26.03■■□□□ 1.76
LINC00543-201ENST00000567234 ASTN2O75129 1339 aaPredicted RBP26.03■■□□□ 1.76
LINC00543-201ENST00000567234 LRRC10BA6NIK2 292 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 SPDYE3A6NKU9 549 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 H7C1D1 291 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 RASA3Q14644 834 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 PTPN14Q15678 1187 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 USH1GQ495M9 461 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 COBLL1Q53SF7 1204 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 HYIQ5T013 277 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 FAM83BQ5T0W9 1011 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 SNX29Q8TEQ0 813 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 POTEMA6NI47 508 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 SNAP25P60880 206 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 Q4G0T1 1027 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 FILIP1LQ4L180 1135 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 LARP4BQ92615 738 aaKnown RBP26.02■■□□□ 1.76
LINC00543-201ENST00000567234 RANBP17Q9H2T7 1088 aaKnown RBP26.02■■□□□ 1.76
LINC00543-201ENST00000567234 ADD3Q9UEY8 706 aaKnown RBP26.02■■□□□ 1.76
LINC00543-201ENST00000567234 LIMA1Q9UHB6 759 aaKnown RBP26.02■■□□□ 1.76
LINC00543-201ENST00000567234 FEM1BQ9UK73 627 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 KDM3AQ9Y4C1 1321 aa26.02■■□□□ 1.76
LINC00543-201ENST00000567234 SMCHD1A6NHR9 2005 aa26.01■■□□□ 1.75
LINC00543-201ENST00000567234 PSMA7O14818 248 aa26.01■■□□□ 1.75
LINC00543-201ENST00000567234 BMS1Q14692 1282 aaKnown RBP26.01■■□□□ 1.75
LINC00543-201ENST00000567234 DHTKD1Q96HY7 919 aaPredicted RBP26.01■■□□□ 1.75
LINC00543-201ENST00000567234 EXOC1Q9NV70 894 aa26.01■■□□□ 1.75
LINC00543-201ENST00000567234 PVALEFA0A1B0GWK0 134 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 PHF20L1A8MW92 1017 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 OPLAHO14841 1288 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 SLU7O95391 586 aaKnown RBP26■■□□□ 1.75
LINC00543-201ENST00000567234 CIITAP33076 1130 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 RAD54LQ92698 747 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 TEPSINQ96N21 525 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 NT5C3AQ9H0P0 336 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 TMX1Q9H3N1 280 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 CYP3A4P08684 503 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 ASIC1P78348 528 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 ANKRD20A12PQ8NF67 263 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 GPRC5DQ9NZD1 345 aa26■■□□□ 1.75
LINC00543-201ENST00000567234 EPS15P42566 896 aa25.99■■□□□ 1.75
LINC00543-201ENST00000567234 TRPM4Q8TD43 1214 aa25.99■■□□□ 1.75
LINC00543-201ENST00000567234 P2RX7Q99572 595 aaKnown RBP25.99■■□□□ 1.75
LINC00543-201ENST00000567234 STK24Q9Y6E0 443 aa25.99■■□□□ 1.75
LINC00543-201ENST00000567234 PDE4DQ08499 809 aa25.98■■□□□ 1.75
LINC00543-201ENST00000567234 KIF4BQ2VIQ3 1234 aa25.98■■□□□ 1.75
LINC00543-201ENST00000567234 NOC3LQ8WTT2 800 aaKnown RBP25.98■■□□□ 1.75
LINC00543-201ENST00000567234 TULP2O00295 520 aa25.98■■□□□ 1.75
LINC00543-201ENST00000567234 UNC13DQ70J99 1090 aa25.98■■□□□ 1.75
LINC00543-201ENST00000567234 FAM20AQ96MK3 541 aa25.98■■□□□ 1.75
LINC00543-201ENST00000567234 PBX1P40424 430 aa25.97■■□□□ 1.75
LINC00543-201ENST00000567234 MCM6Q14566 821 aa25.97■■□□□ 1.75
LINC00543-201ENST00000567234 CCAR2Q8N163 923 aaKnown RBP25.97■■□□□ 1.75
LINC00543-201ENST00000567234 ETNPPLQ8TBG4 499 aa25.97■■□□□ 1.75
LINC00543-201ENST00000567234 NUDT12Q9BQG2 462 aa25.97■■□□□ 1.75
LINC00543-201ENST00000567234 THAP9Q9H5L6 903 aa25.97■■□□□ 1.75
LINC00543-201ENST00000567234 L2HGDHQ9H9P8 463 aa25.97■■□□□ 1.75
LINC00543-201ENST00000567234 MRPL11Q9Y3B7 192 aaKnown RBP25.97■■□□□ 1.75
LINC00543-201ENST00000567234 BICDL2A1A5D9 508 aa25.96■■□□□ 1.75
LINC00543-201ENST00000567234 ATP8B1O43520 1251 aa25.96■■□□□ 1.75
LINC00543-201ENST00000567234 TCP11X2Q5H9J9 407 aa25.96■■□□□ 1.75
LINC00543-201ENST00000567234 MYMKA6NI61 221 aa25.95■■□□□ 1.75
LINC00543-201ENST00000567234 KRT31Q15323 416 aa25.95■■□□□ 1.75
LINC00543-201ENST00000567234 LPAR1Q92633 364 aa25.95■■□□□ 1.75
LINC00543-201ENST00000567234 KIFC2Q96AC6 838 aa25.95■■□□□ 1.75
LINC00543-201ENST00000567234 MAPK8IP1Q9UQF2 711 aa25.95■■□□□ 1.75
LINC00543-201ENST00000567234 ABCB11O95342 1321 aa25.95■■□□□ 1.74
LINC00543-201ENST00000567234 ITIH6Q6UXX5 1313 aa25.95■■□□□ 1.74
LINC00543-201ENST00000567234 GRIN3BO60391 1043 aa25.95■■□□□ 1.74
LINC00543-201ENST00000567234 CTNND1O60716 968 aaKnown RBP25.95■■□□□ 1.74
LINC00543-201ENST00000567234 CCNE1P24864 410 aa25.95■■□□□ 1.74
LINC00543-201ENST00000567234 TTI2Q6NXR4 508 aa25.95■■□□□ 1.74
LINC00543-201ENST00000567234 LENG9Q96B70 501 aa25.95■■□□□ 1.74
LINC00543-201ENST00000567234 DEFB129Q9H1M3 183 aa25.95■■□□□ 1.74
LINC00543-201ENST00000567234 KCNJ18B7U540 433 aa25.94■■□□□ 1.74
LINC00543-201ENST00000567234 H2AFXP16104 143 aaPredicted RBP25.94■■□□□ 1.74
LINC00543-201ENST00000567234 EEF1GP26641 437 aaKnown RBP25.94■■□□□ 1.74
LINC00543-201ENST00000567234 CCT6AP40227 531 aaKnown RBP25.94■■□□□ 1.74
LINC00543-201ENST00000567234 PSMD2Q13200 908 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms