RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 GOLGA6AQ9NYA3 693 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 RAB21Q9UL25 225 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 PDS5AQ29RF7 1337 aaKnown RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 H7C1D1 291 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 FZD9O00144 591 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 NFKBIEO00221 500 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 ATP2C2O75185 946 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 CYLC1P35663 651 aaPredicted RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 TNNI2P48788 182 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 PDCLQ13371 301 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 PICALMQ13492 652 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 SLC35G1Q2M3R5 365 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 MAP9Q49MG5 647 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 TRMT1LQ7Z2T5 733 aaKnown RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 TRAPPC11Q7Z392 1133 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 SH3RF3Q8TEJ3 882 aaPredicted RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 NSUN4Q96CB9 384 aaKnown RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 CDK5RAP3Q96JB5 506 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 RUFY1Q96T51 708 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 GBP3Q9H0R5 595 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 HAUS4Q9H6D7 363 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 IL17RBQ9NRM6 502 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 RBM28Q9NW13 759 aaKnown RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 RMND1Q9NWS8 449 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 HPCAL4Q9UM19 191 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 KLRF2D3W0D1 207 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 POTEB2H3BUK9 544 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 HIBADHP31937 336 aaKnown RBP7.18□□□□□ -1.26
GINS3-206ENST00000567143 HPDP32754 393 aaPredicted RBP7.18□□□□□ -1.26
GINS3-206ENST00000567143 KIF5BP33176 963 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 RCSD1Q6JBY9 416 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 POTEDQ86YR6 584 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 KLHL7Q8IXQ5 586 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 FAM71BQ8TC56 605 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 BCAS4Q8TDM0 211 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 DUSP9Q99956 384 aaKnown RBP7.18□□□□□ -1.26
GINS3-206ENST00000567143 ACBD3Q9H3P7 528 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 SALL4Q9UJQ4 1053 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 AKAP11Q9UKA4 1901 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 TAF1P21675 1872 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 SMCO2A6NFE2 343 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 BMP15O95972 392 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 PRELPP51888 382 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 PACS2Q86VP3 889 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 LRRC47Q8N1G4 583 aaKnown RBP7.18□□□□□ -1.26
GINS3-206ENST00000567143 ARL8AQ96BM9 186 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 CCDC51Q96ER9 411 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 GPCPD1Q9NPB8 672 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 BCCIPQ9P287 314 aaKnown RBP eCLIP7.18□□□□□ -1.26
GINS3-206ENST00000567143 PCDHA6Q9UN73 950 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 PCDHA4Q9UN74 947 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 PCDHA8Q9Y5H6 950 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 MYH10P35580 1976 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 RASSF10A6NK89 507 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 LRRC53A6NM62 1247 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 SLC1A4P43007 532 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 GNGT1P63211 74 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 KRT83P78385 493 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 SPTY2D1Q68D10 685 aaPredicted RBP7.18□□□□□ -1.26
GINS3-206ENST00000567143 TTI2Q6NXR4 508 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 FAM76AQ8TAV0 307 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 TBCKQ8TEA7 893 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 P2RX5Q93086 422 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 PIGSQ96S52 555 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 NUDT12Q9BQG2 462 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.18□□□□□ -1.26
GINS3-206ENST00000567143 BCS1LQ9Y276 419 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 CCDC88AQ3V6T2 1871 aa7.18□□□□□ -1.26
GINS3-206ENST00000567143 BAZ2AQ9UIF9 1905 aaKnown RBP7.17□□□□□ -1.26
GINS3-206ENST00000567143 PPEF1O14829 653 aaPredicted RBP7.17□□□□□ -1.26
GINS3-206ENST00000567143 KLRC4O43908 158 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 TDP2O95551 362 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 CALM1P0DP23 149 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 CALM2P0DP24 149 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 CALM3P0DP25 149 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 SLC16A2P36021 539 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 MAGEA1P43355 309 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 DNM2P50570 870 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 KIF11P52732 1056 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 HLTFQ14527 1009 aaKnown RBP eCLIP7.17□□□□□ -1.26
GINS3-206ENST00000567143 LLGL1Q15334 1064 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 UBE2SQ16763 222 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 MUM1L1Q5H9M0 696 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 FBXW10Q5XX13 1052 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 ADAT2Q7Z6V5 191 aaKnown RBP7.17□□□□□ -1.26
GINS3-206ENST00000567143 GPATCH11Q8N954 259 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 TSEN2Q8NCE0 465 aaKnown RBP7.17□□□□□ -1.26
GINS3-206ENST00000567143 TRIM9Q9C026 710 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 ARHGAP20Q9P2F6 1191 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 CAPN11Q9UMQ6 739 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 NFU1Q9UMS0 254 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 COL1A1P02452 1464 aaPredicted RBP7.17□□□□□ -1.26
GINS3-206ENST00000567143 MAST2Q6P0Q8 1798 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 NPHP3-ACAD11A0A0J9YXS1 232 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 LRRC10BA6NIK2 292 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 LMNB1P20700 586 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 CHRNA5P30532 468 aa7.17□□□□□ -1.26
GINS3-206ENST00000567143 LONP1P36776 959 aaKnown RBP7.17□□□□□ -1.26
GINS3-206ENST00000567143 RPS8P62241 208 aaKnown RBP7.17□□□□□ -1.26
GINS3-206ENST00000567143 GUCY2DQ02846 1103 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms