RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 LRRC8DQ7L1W4 858 aa18.16■□□□□ 0.5
PALB2-205ENST00000567003 SYTL5Q8TDW5 730 aaPredicted RBP18.16■□□□□ 0.5
PALB2-205ENST00000567003 AFAP1L1Q8TED9 768 aa18.16■□□□□ 0.5
PALB2-205ENST00000567003 LRFN3Q9BTN0 628 aa18.16■□□□□ 0.5
PALB2-205ENST00000567003 MYH6P13533 1939 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 NBNO60934 754 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 SELPP16109 830 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 FAM117BQ6P1L5 589 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 MFSD6Q6ZSS7 791 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 CCDC155Q8N6L0 562 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 CAGE1Q8TC20 777 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 WNT8BQ93098 351 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 ALG1Q9BT22 464 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 ZBED2Q9BTP6 218 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 PNMA2Q9UL42 364 aa18.15■□□□□ 0.5
PALB2-205ENST00000567003 MYH7BA7E2Y1 1941 aa18.14■□□□□ 0.49
PALB2-205ENST00000567003 FAM86C2PA6NEL3 165 aa18.14■□□□□ 0.49
PALB2-205ENST00000567003 SORBS3O60504 671 aa18.14■□□□□ 0.49
PALB2-205ENST00000567003 ZNF286BP0CG31 522 aa18.14■□□□□ 0.49
PALB2-205ENST00000567003 CNKSR3Q6P9H4 555 aa18.14■□□□□ 0.49
PALB2-205ENST00000567003 TTC14Q96N46 770 aa18.14■□□□□ 0.49
PALB2-205ENST00000567003 HDAC6Q9UBN7 1215 aa18.14■□□□□ 0.49
PALB2-205ENST00000567003 ZMYM6O95789 1325 aa18.14■□□□□ 0.49
PALB2-205ENST00000567003 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
PALB2-205ENST00000567003 B4DLN1 442 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 CKBP12277 381 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 EIF2AK2P19525 551 aaKnown RBP18.13■□□□□ 0.49
PALB2-205ENST00000567003 PSEN2P49810 448 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 MRPL12P52815 198 aaKnown RBP18.13■□□□□ 0.49
PALB2-205ENST00000567003 ZNF200P98182 395 aaPredicted RBP18.13■□□□□ 0.49
PALB2-205ENST00000567003 SESTD1Q86VW0 696 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 RGS22Q8NE09 1264 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 RMDN3Q96TC7 470 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 CD320Q9NPF0 282 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 ZBTB47Q9UFB7 747 aaPredicted RBP18.13■□□□□ 0.49
PALB2-205ENST00000567003 GTF2IRD1Q9UHL9 959 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 SIP14410 1827 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 LAMA4Q16363 1823 aa18.13■□□□□ 0.49
PALB2-205ENST00000567003 CXCL10P02778 98 aa18.12■□□□□ 0.49
PALB2-205ENST00000567003 MBTPS1Q14703 1052 aa18.12■□□□□ 0.49
PALB2-205ENST00000567003 QRICH1Q2TAL8 776 aa18.12■□□□□ 0.49
PALB2-205ENST00000567003 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
PALB2-205ENST00000567003 TRAF7Q6Q0C0 670 aa18.12■□□□□ 0.49
PALB2-205ENST00000567003 ADGRF4Q8IZF3 695 aa18.12■□□□□ 0.49
PALB2-205ENST00000567003 PNMA1Q8ND90 353 aa18.12■□□□□ 0.49
PALB2-205ENST00000567003 NSUN6Q8TEA1 469 aaKnown RBP18.12■□□□□ 0.49
PALB2-205ENST00000567003 SUGCTQ9HAC7 445 aa18.12■□□□□ 0.49
PALB2-205ENST00000567003 C11orf16Q9NQ32 467 aa18.12■□□□□ 0.49
PALB2-205ENST00000567003 ABCB11O95342 1321 aa18.12■□□□□ 0.49
PALB2-205ENST00000567003 LINC01553A4QN01 128 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 TRIM6-TRIM34B2RNG4 842 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 GJB5O95377 273 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 CASTP20810 708 aaKnown RBP18.11■□□□□ 0.49
PALB2-205ENST00000567003 HIC1Q14526 733 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 MFSD10Q14728 455 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 STXBP2Q15833 593 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 DGKDQ16760 1214 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 TRIM71Q2Q1W2 868 aaKnown RBP18.11■□□□□ 0.49
PALB2-205ENST00000567003 TMEM31Q5JXX7 168 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 C7orf31Q8N865 590 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 ESR2Q92731 530 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 VAT1LQ9HCJ6 419 aa18.11■□□□□ 0.49
PALB2-205ENST00000567003 DDX41Q9UJV9 622 aaKnown RBP18.11■□□□□ 0.49
PALB2-205ENST00000567003 KDM4AO75164 1064 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 RBL2Q08999 1139 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 KIAA0753Q2KHM9 967 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 ZNF618Q5T7W0 954 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 ARHGEF16Q5VV41 709 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.1■□□□□ 0.49
PALB2-205ENST00000567003 RILPL2Q969X0 211 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 CRBNQ96SW2 442 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 RAD9AQ99638 391 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 MRVI1Q9Y6F6 885 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 MICAL3Q7RTP6 2002 aa18.1■□□□□ 0.49
PALB2-205ENST00000567003 DHX16O60231 1041 aaKnown RBP18.09■□□□□ 0.49
PALB2-205ENST00000567003 ERVK-21P61565 698 aa18.09■□□□□ 0.49
PALB2-205ENST00000567003 DGKHQ86XP1 1220 aa18.09■□□□□ 0.49
PALB2-205ENST00000567003 TGS1Q96RS0 853 aaKnown RBP18.09■□□□□ 0.49
PALB2-205ENST00000567003 LNPKQ9C0E8 428 aa18.09■□□□□ 0.49
PALB2-205ENST00000567003 RNF41Q9H4P4 317 aaPredicted RBP18.09■□□□□ 0.49
PALB2-205ENST00000567003 UBE2ZQ9H832 354 aaPredicted RBP18.09■□□□□ 0.49
PALB2-205ENST00000567003 KAT14Q9H8E8 782 aa18.09■□□□□ 0.49
PALB2-205ENST00000567003 JMJD4Q9H9V9 463 aa18.09■□□□□ 0.49
PALB2-205ENST00000567003 PXMP2Q9NR77 195 aa18.09■□□□□ 0.49
PALB2-205ENST00000567003 HCN4Q9Y3Q4 1203 aa18.09■□□□□ 0.49
PALB2-205ENST00000567003 MUC6Q6W4X9 2439 aa18.08■□□□□ 0.49
PALB2-205ENST00000567003 ABHD14A-ACY1A0A1B0GW23 586 aa18.08■□□□□ 0.48
PALB2-205ENST00000567003 B4E1Z4 1266 aa18.08■□□□□ 0.48
PALB2-205ENST00000567003 HAS3O00219 553 aa18.08■□□□□ 0.48
PALB2-205ENST00000567003 F2P00734 622 aa18.08■□□□□ 0.48
PALB2-205ENST00000567003 CFBP00751 764 aa18.08■□□□□ 0.48
PALB2-205ENST00000567003 PCP11498 1178 aaKnown RBP18.08■□□□□ 0.48
PALB2-205ENST00000567003 PTK7Q13308 1070 aa18.08■□□□□ 0.48
PALB2-205ENST00000567003 FBXO11Q86XK2 927 aa18.08■□□□□ 0.48
PALB2-205ENST00000567003 ZFP91Q96JP5 570 aaPredicted RBP18.08■□□□□ 0.48
PALB2-205ENST00000567003 IWS1Q96ST2 819 aa18.08■□□□□ 0.48
PALB2-205ENST00000567003 C17orf80Q9BSJ5 609 aa18.08■□□□□ 0.48
PALB2-205ENST00000567003 MRPL11Q9Y3B7 192 aaKnown RBP18.08■□□□□ 0.48
PALB2-205ENST00000567003 ZNF213O14771 459 aa18.07■□□□□ 0.48
PALB2-205ENST00000567003 OPLAHO14841 1288 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms