RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 MAML3Q96JK9 1138 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 FGD4Q96M96 766 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 PTCH2Q9Y6C5 1203 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 ASTN1O14525 1302 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 MMP1P03956 469 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 XRCC5P13010 732 aaKnown RBP13.13□□□□□ -0.31
KARS-207ENST00000566560 EIF2AK2P19525 551 aaKnown RBP13.13□□□□□ -0.31
KARS-207ENST00000566560 KRT2P35908 639 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 CLK2P49760 499 aaKnown RBP13.13□□□□□ -0.31
KARS-207ENST00000566560 ALDH5A1P51649 535 aaPredicted RBP13.13□□□□□ -0.31
KARS-207ENST00000566560 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
KARS-207ENST00000566560 NPY5RQ15761 445 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 CCL14Q16627 93 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 ARHGEF16Q5VV41 709 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 JAKMIP3Q5VZ66 844 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 DNERQ8NFT8 737 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 PGBD1Q96JS3 809 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 TAAR1Q96RJ0 339 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 RMDN3Q96TC7 470 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 MPHOSPH6Q99547 160 aaKnown RBP13.13□□□□□ -0.31
KARS-207ENST00000566560 ANO3Q9BYT9 981 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 EHMT1Q9H9B1 1298 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 TMEM260Q9NX78 707 aa13.13□□□□□ -0.31
KARS-207ENST00000566560 BIN2Q9UBW5 565 aaPredicted RBP13.13□□□□□ -0.31
KARS-207ENST00000566560 DIS3Q9Y2L1 958 aaKnown RBP13.13□□□□□ -0.31
KARS-207ENST00000566560 H3BQV1 296 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 ADAMTS3O15072 1205 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 ADCY3O60266 1144 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 ELNP15502 786 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 PDCP20941 246 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 OLFML2BQ68BL8 750 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 DIS3L2Q8IYB7 885 aaKnown RBP13.12□□□□□ -0.31
KARS-207ENST00000566560 TRMT44Q8IYL2 757 aaKnown RBP13.12□□□□□ -0.31
KARS-207ENST00000566560 FBXO18Q8NFZ0 1043 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 NSUN6Q8TEA1 469 aaKnown RBP13.12□□□□□ -0.31
KARS-207ENST00000566560 TRIB2Q92519 343 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 PXMP2Q9NR77 195 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 FLRT1Q9NZU1 646 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 PTPN22Q9Y2R2 807 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
KARS-207ENST00000566560 RPTORQ8N122 1335 aa13.12□□□□□ -0.31
KARS-207ENST00000566560 KIAA1217Q5T5P2 1943 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 LOC102724159A0A0B4J2E5 919 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 ASB14A6NK59 587 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 B4DLN1 442 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 FOSP01100 380 aaPredicted RBP13.11□□□□□ -0.31
KARS-207ENST00000566560 HMGCRP04035 888 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 PRKCSHP14314 528 aaPredicted RBP13.11□□□□□ -0.31
KARS-207ENST00000566560 UBXN2AP68543 259 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
KARS-207ENST00000566560 PWP2Q15269 919 aaKnown RBP13.11□□□□□ -0.31
KARS-207ENST00000566560 LARP1BQ659C4 914 aaKnown RBP13.11□□□□□ -0.31
KARS-207ENST00000566560 MCTP2Q6DN12 878 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 FBXO46Q6PJ61 603 aaPredicted RBP13.11□□□□□ -0.31
KARS-207ENST00000566560 ARMCX2Q7L311 632 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 MSL3Q8N5Y2 521 aaKnown RBP13.11□□□□□ -0.31
KARS-207ENST00000566560 IL31RAQ8NI17 732 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 PDCD2LQ9BRP1 358 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 TINF2Q9BSI4 451 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 PCDHA6Q9UN73 950 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 PCDHA8Q9Y5H6 950 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
KARS-207ENST00000566560 SYNGAP1Q96PV0 1343 aa13.11□□□□□ -0.31
KARS-207ENST00000566560 CCDC194A0A1B0GVG4 234 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
KARS-207ENST00000566560 M0R2N6 131 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 EDNRBP24530 442 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 CCND2P30279 289 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 GRK4P32298 578 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 SREBF1P36956 1147 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 PDE4DQ08499 809 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 NR5A1Q13285 461 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 PGM5Q15124 567 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 PKN2Q16513 984 aaKnown RBP13.1□□□□□ -0.31
KARS-207ENST00000566560 MFSD14CQ5VZR4 134 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 MAMDC4Q6UXC1 1216 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
KARS-207ENST00000566560 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.1□□□□□ -0.31
KARS-207ENST00000566560 DAXXQ9UER7 740 aaPredicted RBP13.1□□□□□ -0.31
KARS-207ENST00000566560 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 BTBD18B2RXH4 712 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 MYCLP12524 364 aaPredicted RBP13.09□□□□□ -0.31
KARS-207ENST00000566560 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
KARS-207ENST00000566560 CYP2C19P33261 490 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 NONOQ15233 471 aaKnown RBP eCLIP13.09□□□□□ -0.31
KARS-207ENST00000566560 SLC9C1Q4G0N8 1177 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 MCTP1Q6DN14 999 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 PIK3AP1Q6ZUJ8 805 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 FBXO16Q8IX29 292 aaPredicted RBP13.09□□□□□ -0.31
KARS-207ENST00000566560 MORC4Q8TE76 937 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 IWS1Q96ST2 819 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 ZHX1Q9UKY1 873 aaPredicted RBP13.09□□□□□ -0.31
KARS-207ENST00000566560 CNPY2Q9Y2B0 182 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 MYH15Q9Y2K3 1946 aa13.09□□□□□ -0.31
KARS-207ENST00000566560 KIF28PB7ZC32 967 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms