RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 KRT2P35908 639 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 SEMA3FQ13275 785 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 MTFR1Q15390 333 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 ARHGEF16Q5VV41 709 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 VSIG10LQ86VR7 867 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 LENG1Q96BZ8 264 aaPredicted RBP9.34□□□□□ -0.91
CDH13-208ENST00000566333 ZFP91Q96JP5 570 aaPredicted RBP9.34□□□□□ -0.91
CDH13-208ENST00000566333 INPP4AQ96PE3 977 aaPredicted RBP9.34□□□□□ -0.91
CDH13-208ENST00000566333 IWS1Q96ST2 819 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 VTA1Q9NP79 307 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 NRBP1Q9UHY1 535 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 IGLV3-22A0A075B6J6 115 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 ARIH2O95376 493 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 PTGS1P23219 599 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 CCND2P30279 289 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 ARHGAP4P98171 946 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 PDE4DQ08499 809 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 ACVR2BQ13705 512 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 TRIM29Q14134 588 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 PRAMEF19Q5SWL8 479 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 TMEM63BQ5T3F8 832 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 MFSD14CQ5VZR4 134 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 TAPT1Q6NXT6 567 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 EEPD1Q7L9B9 569 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 KRT25Q7Z3Z0 450 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 LENG9Q96B70 501 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 ABHD16BQ9H3Z7 469 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 PAK6Q9NQU5 681 aaPredicted RBP9.33□□□□□ -0.92
CDH13-208ENST00000566333 PDGFCQ9NRA1 345 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 ZHX1Q9UKY1 873 aaPredicted RBP9.33□□□□□ -0.92
CDH13-208ENST00000566333 KIF3AQ9Y496 699 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 ARID2Q68CP9 1835 aa9.33□□□□□ -0.92
CDH13-208ENST00000566333 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.32□□□□□ -0.92
CDH13-208ENST00000566333 RBM47A0AV96 593 aaKnown RBP9.32□□□□□ -0.92
CDH13-208ENST00000566333 POTEFA5A3E0 1075 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 FAM86B1E9PN63 330 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 CYP3A4P08684 503 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 FAM86B2P0C5J1 330 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 MYCLP12524 364 aaPredicted RBP9.32□□□□□ -0.92
CDH13-208ENST00000566333 ITGB5P18084 799 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 SYT1P21579 422 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 U2AF2P26368 475 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDH13-208ENST00000566333 DDIT3P35638 169 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 ADCYAP1R1P41586 468 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 PKP1Q13835 747 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 BECN1Q14457 450 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 NONOQ15233 471 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDH13-208ENST00000566333 STXBP2Q15833 593 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 MCTP2Q6DN12 878 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 XRRA1Q6P2D8 792 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 PIK3AP1Q6ZUJ8 805 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 NOSTRINQ8IVI9 506 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 CYP2W1Q8TAV3 490 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 TBCKQ8TEA7 893 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDH13-208ENST00000566333 FOXP1Q9H334 677 aaPredicted RBP9.32□□□□□ -0.92
CDH13-208ENST00000566333 MTMR6Q9Y217 621 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 CNPY2Q9Y2B0 182 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 UBIAD1Q9Y5Z9 338 aa9.32□□□□□ -0.92
CDH13-208ENST00000566333 TNRC18O15417 2968 aaPredicted RBP9.32□□□□□ -0.92
CDH13-208ENST00000566333 SEPT4O43236 478 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 EIF3JO75822 258 aaKnown RBP9.31□□□□□ -0.92
CDH13-208ENST00000566333 STAM2O75886 525 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 TDP2O95551 362 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 CCL5P13501 91 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 PDCP20941 246 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 UBA1P22314 1058 aaKnown RBP9.31□□□□□ -0.92
CDH13-208ENST00000566333 CIITAP33076 1130 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 INF2Q27J81 1249 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 CCDC144BQ3MJ40 725 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 GJC2Q5T442 439 aaPredicted RBP9.31□□□□□ -0.92
CDH13-208ENST00000566333 LARP1BQ659C4 914 aaKnown RBP9.31□□□□□ -0.92
CDH13-208ENST00000566333 LHX8Q68G74 356 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 CCDC62Q6P9F0 684 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 SPRYD3Q8NCJ5 442 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 MBOAT7Q96N66 472 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 MPHOSPH6Q99547 160 aaKnown RBP9.31□□□□□ -0.92
CDH13-208ENST00000566333 EHMT1Q9H9B1 1298 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 BRMS1Q9HCU9 246 aa9.31□□□□□ -0.92
CDH13-208ENST00000566333 GNEQ9Y223 722 aaKnown RBP9.31□□□□□ -0.92
CDH13-208ENST00000566333 CEP290O15078 2479 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 TRIP12Q14669 1992 aaPredicted RBP9.3□□□□□ -0.92
CDH13-208ENST00000566333 CYP3A7-CYP3A51PA0A087WV96 503 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 CCDC194A0A1B0GVG4 234 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 VPS37CA5D8V6 355 aaPredicted RBP9.3□□□□□ -0.92
CDH13-208ENST00000566333 B4DLN1 442 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 H3BQV1 296 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 MEIS1O00470 390 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 CTAGE5O15320 804 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 STX6O43752 255 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 SLC37A4O43826 429 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
CDH13-208ENST00000566333 HSP90AA1P07900 732 aaKnown RBP9.3□□□□□ -0.92
CDH13-208ENST00000566333 AKR1A1P14550 325 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 KCNA2P16389 499 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 SMPD1P17405 629 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 CYP3A7P24462 503 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 ICAM3P32942 547 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 ANP32AP39687 249 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms