RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 BCRP11274 1271 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 CYP3A7P24462 503 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 GRM1Q13255 1194 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 PTGDRQ13258 359 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 UVSSAQ2YD98 709 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 Q4G0T1 1027 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 MUM1L1Q5H9M0 696 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 AXDND1Q5T1B0 1012 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-207ENST00000566095 KANK3Q6NY19 840 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 KCNV1Q6PIU1 500 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 ANKRD13CQ8N6S4 541 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 A1CFQ9NQ94 594 aaKnown RBP11.11□□□□□ -0.63
SF3B3-207ENST00000566095 PXMP2Q9NR77 195 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 PCDHA7Q9UN72 937 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 COL11A1P12107 1806 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-207ENST00000566095 RPTORQ8N122 1335 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 GADD45BO75293 160 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-207ENST00000566095 CNMDO75829 334 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 TOB1P50616 345 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-207ENST00000566095 STXBP2Q15833 593 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 CEP55Q53EZ4 464 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 CYP4F22Q6NT55 531 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 PLEKHH3Q7Z736 793 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 KCTD17Q8N5Z5 321 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 RASSF8Q8NHQ8 419 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 ERMNQ8TAM6 284 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 SOCS4Q8WXH5 440 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 PTPN18Q99952 460 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 NUP62CLQ9H1M0 184 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 CLSTN2Q9H4D0 955 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 GDPD2Q9HCC8 539 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 CCDC39Q9UFE4 941 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 HPSEQ9Y251 543 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 RIPK3Q9Y572 518 aa11.1□□□□□ -0.63
SF3B3-207ENST00000566095 SLC15A5A6NIM6 579 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 IGF2BP3O00425 579 aaKnown RBP eCLIP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 KINO60870 393 aaKnown RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 CCDC192P0DO97 292 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 MARCKSP29966 332 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 PDE4DQ08499 809 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 SNW1Q13573 536 aaKnown RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 PDIA5Q14554 519 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 PGM5Q15124 567 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 PRR16Q569H4 304 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 EARS2Q5JPH6 523 aaKnown RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 CT47A1Q5JQC4 288 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 RESP18Q5W5W9 173 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 HAUS3Q68CZ6 603 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 SLC30A10Q6XR72 485 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 PLA2G4DQ86XP0 818 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 FMR1NBQ8N0W7 255 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 MSL3Q8N5Y2 521 aaKnown RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 GIMAP8Q8ND71 665 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 GPRASP2Q96D09 838 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 MBOAT7Q96N66 472 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 MXRA8Q9BRK3 442 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 PDCD2LQ9BRP1 358 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 BEGAINQ9BUH8 593 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 GTPBP4Q9BZE4 634 aaKnown RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 WDR11Q9BZH6 1224 aa11.09□□□□□ -0.63
SF3B3-207ENST00000566095 DIS3Q9Y2L1 958 aaKnown RBP11.09□□□□□ -0.63
SF3B3-207ENST00000566095 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 EIF3JO75822 258 aaKnown RBP11.08□□□□□ -0.64
SF3B3-207ENST00000566095 MYL1P05976 194 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 NR3C2P08235 984 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 EIF2AK2P19525 551 aaKnown RBP11.08□□□□□ -0.64
SF3B3-207ENST00000566095 HOXD10P28358 340 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 UBA7P41226 1012 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.641e-7■■■■□ 23.6
SF3B3-207ENST00000566095 ALDH5A1P51649 535 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-207ENST00000566095 FCGRTP55899 365 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 MTMR1Q13613 665 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 DPP9Q86TI2 863 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 FSIP1Q8NA03 581 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 CRYGNQ8WXF5 182 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 CALML4Q96GE6 196 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 CDK5RAP3Q96JB5 506 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 RIT2Q99578 217 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 CFHR5Q9BXR6 569 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 TXNRD2Q9NNW7 524 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 TBC1D22BQ9NU19 505 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 DACT1Q9NYF0 836 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 FBXO2Q9UK22 296 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-207ENST00000566095 PCDHA12Q9UN75 941 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 ADGRA2Q96PE1 1338 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 KDM3AQ9Y4C1 1321 aa11.08□□□□□ -0.64
SF3B3-207ENST00000566095 VWA3AA6NCI4 1184 aa11.07□□□□□ -0.64
SF3B3-207ENST00000566095 MEIS1O00470 390 aa11.07□□□□□ -0.64
SF3B3-207ENST00000566095 DKC1O60832 514 aaKnown RBP eCLIP11.07□□□□□ -0.64
SF3B3-207ENST00000566095 GAS7O60861 476 aa11.07□□□□□ -0.64
SF3B3-207ENST00000566095 TDP2O95551 362 aa11.07□□□□□ -0.64
SF3B3-207ENST00000566095 GNRH1P01148 92 aa11.07□□□□□ -0.64
SF3B3-207ENST00000566095 MYCLP12524 364 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-207ENST00000566095 TXKP42681 527 aa11.07□□□□□ -0.64
SF3B3-207ENST00000566095 CRHR2Q13324 411 aa11.07□□□□□ -0.64
SF3B3-207ENST00000566095 IRF5Q13568 498 aa11.07□□□□□ -0.64
SF3B3-207ENST00000566095 ZRSR1Q15695 479 aaKnown RBP11.07□□□□□ -0.64
SF3B3-207ENST00000566095 KRT79Q5XKE5 535 aa11.07□□□□□ -0.64
SF3B3-207ENST00000566095 C17orf99Q6UX52 265 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms