RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 STX6O43752 255 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 STAM2O75886 525 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 EIF2AK2P19525 551 aaKnown RBP14.39□□□□□ -0.11
SF3B3-206ENST00000565990 CYP3A7P24462 503 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 CIITAP33076 1130 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 STXBP2Q15833 593 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 MAP3K21Q5TCX8 1036 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 IFFO2Q5TF58 517 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 ARMCX2Q7L311 632 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 MPHOSPH6Q99547 160 aaKnown RBP14.39□□□□□ -0.11
SF3B3-206ENST00000565990 ABHD16BQ9H3Z7 469 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 EHMT1Q9H9B1 1298 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 MTMR6Q9Y217 621 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 RGS20O76081 388 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 GRK4P32298 578 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 FOSBP53539 338 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 ARHGAP4P98171 946 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 NONOQ15233 471 aaKnown RBP eCLIP14.38□□□□□ -0.11
SF3B3-206ENST00000565990 TAPT1Q6NXT6 567 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 NOSTRINQ8IVI9 506 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 IL31RAQ8NI17 732 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 TBCKQ8TEA7 893 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 PGBD1Q96JS3 809 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.38□□□□□ -0.11
SF3B3-206ENST00000565990 UBIAD1Q9Y5Z9 338 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 HTTP42858 3142 aa14.38□□□□□ -0.11
SF3B3-206ENST00000565990 CCDC194A0A1B0GVG4 234 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 KIF28PB7ZC32 967 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 MEIS1O00470 390 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 MAFGO15525 162 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 HMGCRP04035 888 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 ZNF865P0CJ78 1059 aaPredicted RBP14.37□□□□□ -0.11
SF3B3-206ENST00000565990 ELNP15502 786 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 ITGB5P18084 799 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 CCND2P30279 289 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 CYP2C19P33261 490 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 CACNB2Q08289 660 aaPredicted RBP14.37□□□□□ -0.11
SF3B3-206ENST00000565990 PDE4DQ08499 809 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 KLHL40Q2TBA0 621 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 MFSD14CQ5VZR4 134 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 MOXD1Q6UVY6 613 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 NIPA1Q7RTP0 329 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 MBOAT7Q96N66 472 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 VTA1Q9NP79 307 aa14.37□□□□□ -0.11
SF3B3-206ENST00000565990 DDX49Q9Y6V7 483 aaKnown RBP14.37□□□□□ -0.11
SF3B3-206ENST00000565990 SPATA31C2B4DYI2 1134 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 MYCLP12524 364 aaPredicted RBP14.36□□□□□ -0.11
SF3B3-206ENST00000565990 ICAM3P32942 547 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 UBXN2AP68543 259 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 TRIM32Q13049 653 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 ACVR2BQ13705 512 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 INF2Q27J81 1249 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 PPP4R3AQ6IN85 833 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 INPP4AQ96PE3 977 aaPredicted RBP14.36□□□□□ -0.11
SF3B3-206ENST00000565990 MXRA8Q9BRK3 442 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 JADE2Q9NQC1 790 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 ZDHHC9Q9Y397 364 aa14.36□□□□□ -0.11
SF3B3-206ENST00000565990 IGLV3-22A0A075B6J6 115 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 FAM205CA6NFA0 338 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 FAM86B1E9PN63 330 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 FAM86B2P0C5J1 330 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 TGFB3P10600 412 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 CYBAP13498 195 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 TRAPPC10P48553 1259 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 TOB1P50616 345 aaPredicted RBP14.35□□□□□ -0.11
SF3B3-206ENST00000565990 PKP1Q13835 747 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 CEP55Q53EZ4 464 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 PRAMEF19Q5SWL8 479 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 IQSEC1Q6DN90 963 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 CCDC62Q6P9F0 684 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 NEK8Q86SG6 692 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 CYP2W1Q8TAV3 490 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 ARMC5Q96C12 935 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 ZSCAN16Q9H4T2 348 aaPredicted RBP14.35□□□□□ -0.11
SF3B3-206ENST00000565990 RTEL1Q9NZ71 1219 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 CNPY2Q9Y2B0 182 aa14.35□□□□□ -0.11
SF3B3-206ENST00000565990 CENPFP49454 3210 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 VPS37CA5D8V6 355 aaPredicted RBP14.34□□□□□ -0.11
SF3B3-206ENST00000565990 BRD1O95696 1058 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 INHAP05111 366 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 ZSCAN22P10073 491 aaPredicted RBP14.34□□□□□ -0.11
SF3B3-206ENST00000565990 XRCC6P12956 609 aaKnown RBP eCLIP14.34□□□□□ -0.11
SF3B3-206ENST00000565990 RESTQ13127 1097 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 Q4G0T1 1027 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 MCTP1Q6DN14 999 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 KCNV1Q6PIU1 500 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 LENG9Q96B70 501 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 GPRASP2Q96D09 838 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 NAP1L4Q99733 375 aaKnown RBP14.34□□□□□ -0.11
SF3B3-206ENST00000565990 GRPEL1Q9HAV7 217 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 PDGFCQ9NRA1 345 aa14.34□□□□□ -0.11
SF3B3-206ENST00000565990 DDX41Q9UJV9 622 aaKnown RBP14.34□□□□□ -0.11
SF3B3-206ENST00000565990 MYH15Q9Y2K3 1946 aa14.33□□□□□ -0.11
SF3B3-206ENST00000565990 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
SF3B3-206ENST00000565990 SEMA3FQ13275 785 aa14.33□□□□□ -0.12
SF3B3-206ENST00000565990 GNL2Q13823 731 aaKnown RBP14.33□□□□□ -0.12
SF3B3-206ENST00000565990 CCDC144BQ3MJ40 725 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms