RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ZNFX1Q9P2E3 1918 aaKnown RBP21.2■□□□□ 0.98
COMMD4-213ENST00000565834 KINO60870 393 aaKnown RBP21.2■□□□□ 0.98
COMMD4-213ENST00000565834 PGM5Q15124 567 aa21.2■□□□□ 0.98
COMMD4-213ENST00000565834 TMEM266Q2M3C6 531 aa21.2■□□□□ 0.98
COMMD4-213ENST00000565834 CEP55Q53EZ4 464 aa21.2■□□□□ 0.98
COMMD4-213ENST00000565834 IL31RAQ8NI17 732 aa21.2■□□□□ 0.98
COMMD4-213ENST00000565834 NSUN6Q8TEA1 469 aaKnown RBP21.2■□□□□ 0.98
COMMD4-213ENST00000565834 SYMPKQ92797 1274 aaKnown RBP21.2■□□□□ 0.98
COMMD4-213ENST00000565834 LENG9Q96B70 501 aa21.2■□□□□ 0.98
COMMD4-213ENST00000565834 PURBQ96QR8 312 aaKnown RBP21.2■□□□□ 0.98
COMMD4-213ENST00000565834 PDCD2LQ9BRP1 358 aa21.2■□□□□ 0.98
COMMD4-213ENST00000565834 KCNMB3Q9NPA1 279 aa21.2■□□□□ 0.98
COMMD4-213ENST00000565834 IGLV3-22A0A075B6J6 115 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 TBX3O15119 743 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 SYKP43405 635 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 GRM1Q13255 1194 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 WDR78Q5VTH9 848 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 IFNL1Q8IU54 200 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 SLFN12Q8IYM2 578 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 CYP2W1Q8TAV3 490 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 HAS1Q92839 578 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 EPSTI1Q96J88 318 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 KCNH3Q9ULD8 1083 aa21.19■□□□□ 0.98
COMMD4-213ENST00000565834 TECP42680 631 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 FXR2P51116 673 aaKnown RBP eCLIP21.18■□□□□ 0.98
COMMD4-213ENST00000565834 SETQ01105 290 aaPredicted RBP21.18■□□□□ 0.98
COMMD4-213ENST00000565834 TAF1CQ15572 869 aaPredicted RBP21.18■□□□□ 0.98
COMMD4-213ENST00000565834 USP49Q70CQ1 688 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 PLA2G4DQ86XP0 818 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 ETNPPLQ8TBG4 499 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 AK8Q96MA6 479 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 RAB34Q9BZG1 259 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 NUP62CLQ9H1M0 184 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 CREBZFQ9NS37 354 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 ZNF202O95125 648 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 TXLNAP40222 546 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 KCTD2Q14681 263 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 FAM110CQ1W6H9 321 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 CYP4F22Q6NT55 531 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 XRRA1Q6P2D8 792 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 DNERQ8NFT8 737 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 MMP19Q99542 508 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 MXRA8Q9BRK3 442 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 PORCNQ9H237 461 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 R3HDMLQ9H3Y0 253 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 CLSTN2Q9H4D0 955 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 TTC12Q9H892 705 aaPredicted RBP21.18■□□□□ 0.98
COMMD4-213ENST00000565834 PLXNB2O15031 1838 aa21.18■□□□□ 0.98
COMMD4-213ENST00000565834 POTEB2H3BUK9 544 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 MEIS1O00470 390 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 MSH4O15457 936 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 MYCLP12524 364 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-213ENST00000565834 CCND2P30279 289 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 APLP1P51693 650 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 ZSCAN23Q3MJ62 389 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 NIPA1Q7RTP0 329 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 IGSF22Q8N9C0 903 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 FAM20AQ96MK3 541 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 EFCC1Q9HA90 598 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 PCDHA12Q9UN75 941 aa21.17■□□□□ 0.98
COMMD4-213ENST00000565834 NR3C2P08235 984 aa21.16■□□□□ 0.98
COMMD4-213ENST00000565834 FCER1AP12319 257 aa21.16■□□□□ 0.98
COMMD4-213ENST00000565834 MRPS9P82933 396 aaKnown RBP21.16■□□□□ 0.98
COMMD4-213ENST00000565834 CNTN2Q02246 1040 aa21.16■□□□□ 0.98
COMMD4-213ENST00000565834 GJA10Q969M2 543 aa21.16■□□□□ 0.98
COMMD4-213ENST00000565834 ZFP91Q96JP5 570 aaPredicted RBP21.16■□□□□ 0.98
COMMD4-213ENST00000565834 UBIAD1Q9Y5Z9 338 aa21.16■□□□□ 0.98
COMMD4-213ENST00000565834 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
COMMD4-213ENST00000565834 RASSF10A6NK89 507 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 ITGB5P18084 799 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 UBA7P41226 1012 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 PDIA5Q14554 519 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 DEFB115Q30KQ5 88 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 UIMC1Q96RL1 719 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 TNMDQ9H2S6 317 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 ADD3Q9UEY8 706 aaKnown RBP21.15■□□□□ 0.98
COMMD4-213ENST00000565834 LRWD1Q9UFC0 647 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 PP2D1A8MPX8 630 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 POLR2DO15514 142 aaKnown RBP21.15■□□□□ 0.98
COMMD4-213ENST00000565834 BCRP11274 1271 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 CDC25AP30304 524 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 TM4SF4P48230 202 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 NOGQ13253 232 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 CAMK4Q16566 473 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 VSIG10LQ86VR7 867 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 PDILTQ8N807 584 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 FAM133AQ8N9E0 248 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 TIGD1Q96MW7 591 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 IWS1Q96ST2 819 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 ZIC5Q96T25 663 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 CPA4Q9UI42 421 aa21.15■□□□□ 0.98
COMMD4-213ENST00000565834 KIAA1217Q5T5P2 1943 aa21.14■□□□□ 0.98
COMMD4-213ENST00000565834 LETM1O95202 739 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-213ENST00000565834 PYM1Q9BRP8 204 aaKnown RBP21.14■□□□□ 0.97
COMMD4-213ENST00000565834 PANK2Q9BZ23 570 aa21.14■□□□□ 0.97
COMMD4-213ENST00000565834 CCSER1Q9C0I3 900 aa21.14■□□□□ 0.97
COMMD4-213ENST00000565834 JADE2Q9NQC1 790 aa21.14■□□□□ 0.97
COMMD4-213ENST00000565834 POTEMA6NI47 508 aa21.13■□□□□ 0.97
COMMD4-213ENST00000565834 ARP10275 920 aa21.13■□□□□ 0.97
COMMD4-213ENST00000565834 ALDH5A1P51649 535 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms