RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ARMCX2Q7L311 632 aa8.84□□□□□ -0.99
CDH1-208ENST00000565810 NPLOC4Q8TAT6 608 aa8.84□□□□□ -0.99
CDH1-208ENST00000565810 USP6NLQ92738 828 aa8.84□□□□□ -0.99
CDH1-208ENST00000565810 MAML3Q96JK9 1138 aa8.84□□□□□ -0.99
CDH1-208ENST00000565810 MXRA8Q9BRK3 442 aa8.84□□□□□ -0.99
CDH1-208ENST00000565810 TINF2Q9BSI4 451 aa8.84□□□□□ -0.99
CDH1-208ENST00000565810 JADE2Q9NQC1 790 aa8.84□□□□□ -0.99
CDH1-208ENST00000565810 RTEL1Q9NZ71 1219 aa8.84□□□□□ -0.99
CDH1-208ENST00000565810 DDX25Q9UHL0 483 aaKnown RBP8.84□□□□□ -0.99
CDH1-208ENST00000565810 TRIM17Q9Y577 477 aa8.84□□□□□ -0.99
CDH1-208ENST00000565810 RLFQ13129 1914 aa8.84□□□□□ -1
CDH1-208ENST00000565810 FRMPD4Q14CM0 1322 aa8.83□□□□□ -1
CDH1-208ENST00000565810 SYNGAP1Q96PV0 1343 aa8.83□□□□□ -1
CDH1-208ENST00000565810 NEMFO60524 1076 aa8.83□□□□□ -1
CDH1-208ENST00000565810 TDP2O95551 362 aa8.83□□□□□ -1
CDH1-208ENST00000565810 HSPA1AP0DMV8 641 aaKnown RBP8.83□□□□□ -1
CDH1-208ENST00000565810 HSPA1BP0DMV9 641 aaKnown RBP8.83□□□□□ -1
CDH1-208ENST00000565810 EDNRBP24530 442 aa8.83□□□□□ -1
CDH1-208ENST00000565810 TOB1P50616 345 aaPredicted RBP8.83□□□□□ -1
CDH1-208ENST00000565810 MRPS9P82933 396 aaKnown RBP8.83□□□□□ -1
CDH1-208ENST00000565810 CEBPZQ03701 1054 aaKnown RBP8.83□□□□□ -1
CDH1-208ENST00000565810 DNM1Q05193 864 aaKnown RBP8.83□□□□□ -1
CDH1-208ENST00000565810 IRF5Q13568 498 aa8.83□□□□□ -1
CDH1-208ENST00000565810 STK38Q15208 465 aa8.83□□□□□ -1
CDH1-208ENST00000565810 Q4G0T1 1027 aa8.83□□□□□ -1
CDH1-208ENST00000565810 PRR16Q569H4 304 aa8.83□□□□□ -1
CDH1-208ENST00000565810 OLFML2BQ68BL8 750 aa8.83□□□□□ -1
CDH1-208ENST00000565810 KCNV1Q6PIU1 500 aa8.83□□□□□ -1
CDH1-208ENST00000565810 NIPA1Q7RTP0 329 aa8.83□□□□□ -1
CDH1-208ENST00000565810 PLA2G4DQ86XP0 818 aa8.83□□□□□ -1
CDH1-208ENST00000565810 CRYGNQ8WXF5 182 aa8.83□□□□□ -1
CDH1-208ENST00000565810 TNPO1Q92973 898 aaKnown RBP8.83□□□□□ -1
CDH1-208ENST00000565810 GBP4Q96PP9 640 aa8.83□□□□□ -1
CDH1-208ENST00000565810 USP28Q96RU2 1077 aa8.83□□□□□ -1
CDH1-208ENST00000565810 SCAND2PQ9GZW5 306 aaPredicted RBP8.83□□□□□ -1
CDH1-208ENST00000565810 ABHD16BQ9H3Z7 469 aa8.83□□□□□ -1
CDH1-208ENST00000565810 VTA1Q9NP79 307 aa8.83□□□□□ -1
CDH1-208ENST00000565810 POLR3EQ9NVU0 708 aa8.83□□□□□ -1
CDH1-208ENST00000565810 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.83□□□□□ -1
CDH1-208ENST00000565810 TFIP11Q9UBB9 837 aaKnown RBP8.83□□□□□ -1
CDH1-208ENST00000565810 TCEAL9Q9UHQ7 104 aa8.83□□□□□ -1
CDH1-208ENST00000565810 GABRQQ9UN88 632 aa8.83□□□□□ -1
CDH1-208ENST00000565810 CNPY2Q9Y2B0 182 aa8.83□□□□□ -1
CDH1-208ENST00000565810 PCDHB6Q9Y5E3 794 aa8.83□□□□□ -1
CDH1-208ENST00000565810 UBIAD1Q9Y5Z9 338 aa8.83□□□□□ -1
CDH1-208ENST00000565810 A0A0G2JMZ2 1700 aa8.83□□□□□ -1
CDH1-208ENST00000565810 FAM86B1E9PN63 330 aa8.82□□□□□ -1
CDH1-208ENST00000565810 MEIS1O00470 390 aa8.82□□□□□ -1
CDH1-208ENST00000565810 LAD1O00515 517 aa8.82□□□□□ -1
CDH1-208ENST00000565810 TBX3O15119 743 aa8.82□□□□□ -1
CDH1-208ENST00000565810 FIBPO43427 364 aa8.82□□□□□ -1
CDH1-208ENST00000565810 YEATS4O95619 227 aa8.82□□□□□ -1
CDH1-208ENST00000565810 FAM86B2P0C5J1 330 aa8.82□□□□□ -1
CDH1-208ENST00000565810 HSPA8P11142 646 aaKnown RBP8.82□□□□□ -1
CDH1-208ENST00000565810 MTMR1Q13613 665 aa8.82□□□□□ -1
CDH1-208ENST00000565810 NBR1Q14596 966 aa8.82□□□□□ -1
CDH1-208ENST00000565810 CALCRLQ16602 461 aa8.82□□□□□ -1
CDH1-208ENST00000565810 SEPT14Q6ZU15 432 aa8.82□□□□□ -1
CDH1-208ENST00000565810 EEPD1Q7L9B9 569 aa8.82□□□□□ -1
CDH1-208ENST00000565810 IL31RAQ8NI17 732 aa8.82□□□□□ -1
CDH1-208ENST00000565810 KCNG4Q8TDN1 519 aa8.82□□□□□ -1
CDH1-208ENST00000565810 MORC4Q8TE76 937 aa8.82□□□□□ -1
CDH1-208ENST00000565810 GPRASP2Q96D09 838 aa8.82□□□□□ -1
CDH1-208ENST00000565810 FGD4Q96M96 766 aa8.82□□□□□ -1
CDH1-208ENST00000565810 FAM20AQ96MK3 541 aa8.82□□□□□ -1
CDH1-208ENST00000565810 MBOAT7Q96N66 472 aa8.82□□□□□ -1
CDH1-208ENST00000565810 ZNF577Q9BSK1 485 aa8.82□□□□□ -1
CDH1-208ENST00000565810 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.82□□□□□ -1
CDH1-208ENST00000565810 ZHX1Q9UKY1 873 aaPredicted RBP8.82□□□□□ -1
CDH1-208ENST00000565810 CLIC4Q9Y696 253 aa8.82□□□□□ -1
CDH1-208ENST00000565810 MRVI1Q9Y6F6 885 aa8.82□□□□□ -1
CDH1-208ENST00000565810 THSD7BQ9C0I4 1608 aa8.81□□□□□ -1
CDH1-208ENST00000565810 GOLGA6L22H0YM25 854 aa8.81□□□□□ -1
CDH1-208ENST00000565810 SPTLC2O15270 562 aa8.81□□□□□ -1
CDH1-208ENST00000565810 FOXN1O15353 648 aa8.81□□□□□ -1
CDH1-208ENST00000565810 EDIL3O43854 480 aa8.81□□□□□ -1
CDH1-208ENST00000565810 ADCY3O60266 1144 aa8.81□□□□□ -1
CDH1-208ENST00000565810 PPP6R2O75170 966 aa8.81□□□□□ -1
CDH1-208ENST00000565810 SNAI1O95863 264 aaPredicted RBP8.81□□□□□ -1
CDH1-208ENST00000565810 OR52Z1P0C646 297 aa8.81□□□□□ -1
CDH1-208ENST00000565810 TGFB3P10600 412 aa8.81□□□□□ -1
CDH1-208ENST00000565810 ITGB5P18084 799 aa8.81□□□□□ -1
CDH1-208ENST00000565810 ICAM3P32942 547 aa8.81□□□□□ -1
CDH1-208ENST00000565810 NASPP49321 788 aaPredicted RBP8.81□□□□□ -1
CDH1-208ENST00000565810 LBX1P52954 281 aa8.81□□□□□ -1
CDH1-208ENST00000565810 PTGDRQ13258 359 aa8.81□□□□□ -1
CDH1-208ENST00000565810 ACVR2BQ13705 512 aa8.81□□□□□ -1
CDH1-208ENST00000565810 TTLL4Q14679 1199 aa8.81□□□□□ -1
CDH1-208ENST00000565810 SLC39A14Q15043 492 aa8.81□□□□□ -1
CDH1-208ENST00000565810 TMEM266Q2M3C6 531 aa8.81□□□□□ -1
CDH1-208ENST00000565810 DTHD1Q6ZMT9 781 aa8.81□□□□□ -1
CDH1-208ENST00000565810 OTOP1Q7RTM1 612 aa8.81□□□□□ -1
CDH1-208ENST00000565810 FBXO16Q8IX29 292 aaPredicted RBP8.81□□□□□ -1
CDH1-208ENST00000565810 SLFN12Q8IYM2 578 aa8.81□□□□□ -1
CDH1-208ENST00000565810 GIMAP8Q8ND71 665 aaPredicted RBP8.81□□□□□ -1
CDH1-208ENST00000565810 SLAIN1Q8ND83 568 aa8.81□□□□□ -1
CDH1-208ENST00000565810 CYP2W1Q8TAV3 490 aa8.81□□□□□ -1
CDH1-208ENST00000565810 PXYLP1Q8TE99 480 aa8.81□□□□□ -1
CDH1-208ENST00000565810 SCFD2Q8WU76 684 aa8.81□□□□□ -1
CDH1-208ENST00000565810 ZFP91Q96JP5 570 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms