RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 MRPL12P52815 198 aaKnown RBP27.61■■■□□ 2.01
RAB40C-209ENST00000565511 STXBP2Q15833 593 aa27.61■■■□□ 2.01
RAB40C-209ENST00000565511 KAT2BQ92831 832 aa27.61■■■□□ 2.01
RAB40C-209ENST00000565511 PCDHA1Q9Y5I3 950 aa27.61■■■□□ 2.01
RAB40C-209ENST00000565511 GH1P01241 217 aa27.6■■■□□ 2.01
RAB40C-209ENST00000565511 WTAPQ15007 396 aa27.6■■■□□ 2.01
RAB40C-209ENST00000565511 RALYLQ86SE5 291 aaKnown RBP27.6■■■□□ 2.01
RAB40C-209ENST00000565511 NCOA7Q8NI08 942 aa27.6■■■□□ 2.01
RAB40C-209ENST00000565511 IGDCC4Q8TDY8 1250 aa27.6■■■□□ 2.01
RAB40C-209ENST00000565511 ZFP91Q96JP5 570 aaPredicted RBP27.6■■■□□ 2.01
RAB40C-209ENST00000565511 PDCD2LQ9BRP1 358 aa27.6■■■□□ 2.01
RAB40C-209ENST00000565511 DDX41Q9UJV9 622 aaKnown RBP27.6■■■□□ 2.01
RAB40C-209ENST00000565511 YBX2Q9Y2T7 364 aaKnown RBP27.6■■■□□ 2.01
RAB40C-209ENST00000565511 CHMP4BP1P59074 171 aa27.59■■■□□ 2.01
RAB40C-209ENST00000565511 BRDTQ58F21 947 aaPredicted RBP27.59■■■□□ 2.01
RAB40C-209ENST00000565511 NFRKBQ6P4R8 1299 aa27.59■■■□□ 2.01
RAB40C-209ENST00000565511 KPNA6O60684 536 aa27.58■■■□□ 2.01
RAB40C-209ENST00000565511 TMEM67Q5HYA8 995 aa27.58■■■□□ 2.01
RAB40C-209ENST00000565511 USP38Q8NB14 1042 aa27.58■■■□□ 2.01
RAB40C-209ENST00000565511 MYL10Q9BUA6 226 aa27.58■■■□□ 2.01
RAB40C-209ENST00000565511 LSG1Q9H089 658 aaKnown RBP27.58■■■□□ 2.01
RAB40C-209ENST00000565511 CHD7Q9P2D1 2997 aa27.58■■■□□ 2.01
RAB40C-209ENST00000565511 DOCK5Q9H7D0 1870 aa27.57■■■□□ 2
RAB40C-209ENST00000565511 PTPRSQ13332 1948 aa27.57■■■□□ 2
RAB40C-209ENST00000565511 SORBS3O60504 671 aa27.57■■■□□ 2
RAB40C-209ENST00000565511 SUPT20HL2P0C7V6 817 aa27.57■■■□□ 2
RAB40C-209ENST00000565511 RABGGTBP53611 331 aa27.57■■■□□ 2
RAB40C-209ENST00000565511 DEFB128Q7Z7B8 93 aa27.57■■■□□ 2
RAB40C-209ENST00000565511 PIBF1Q8WXW3 757 aa27.57■■■□□ 2
RAB40C-209ENST00000565511 GPKOWQ92917 476 aaPredicted RBP eCLIP27.57■■■□□ 2
RAB40C-209ENST00000565511 NKX2-4Q9H2Z4 354 aa27.57■■■□□ 2
RAB40C-209ENST00000565511 LY9Q9HBG7 655 aa27.57■■■□□ 2
RAB40C-209ENST00000565511 EIF3JO75822 258 aaKnown RBP27.56■■■□□ 2
RAB40C-209ENST00000565511 MYCLP12524 364 aaPredicted RBP27.56■■■□□ 2
RAB40C-209ENST00000565511 PGM5Q15124 567 aa27.56■■■□□ 2
RAB40C-209ENST00000565511 GDF6Q6KF10 455 aaPredicted RBP27.56■■■□□ 2
RAB40C-209ENST00000565511 ERICH2A1L162 156 aa27.55■■■□□ 2
RAB40C-209ENST00000565511 ZNF286BP0CG31 522 aa27.55■■■□□ 2
RAB40C-209ENST00000565511 MYOGP15173 224 aa27.55■■■□□ 2
RAB40C-209ENST00000565511 DHX38Q92620 1227 aaKnown RBP27.55■■■□□ 2
RAB40C-209ENST00000565511 COL25A1Q9BXS0 654 aaPredicted RBP27.55■■■□□ 2
RAB40C-209ENST00000565511 PRDM12Q9H4Q4 367 aa27.55■■■□□ 2
RAB40C-209ENST00000565511 MRVI1Q9Y6F6 885 aa27.55■■■□□ 2
RAB40C-209ENST00000565511 VCANP13611 3396 aa27.54■■■□□ 2
RAB40C-209ENST00000565511 PTPN11Q06124 597 aaPredicted RBP27.54■■■□□ 2
RAB40C-209ENST00000565511 EMID1Q96A84 441 aaPredicted RBP27.54■■■□□ 2
RAB40C-209ENST00000565511 PNMA6FA0A0J9YX94 578 aa27.53■■■□□ 2
RAB40C-209ENST00000565511 SP2Q02086 613 aa27.53■■■□□ 2
RAB40C-209ENST00000565511 VSIG10LQ86VR7 867 aa27.53■■■□□ 2
RAB40C-209ENST00000565511 FCHSD1Q86WN1 690 aa27.53■■■□□ 2
RAB40C-209ENST00000565511 RPUSD2Q8IZ73 545 aaKnown RBP27.53■■■□□ 2
RAB40C-209ENST00000565511 ZNF654Q8IZM8 581 aa27.53■■■□□ 2
RAB40C-209ENST00000565511 ESYT1Q9BSJ8 1104 aa27.53■■■□□ 2
RAB40C-209ENST00000565511 BCAS3Q9H6U6 928 aa27.53■■■□□ 2
RAB40C-209ENST00000565511 SPTBN5Q9NRC6 3674 aaKnown RBP27.52■■■□□ 2
RAB40C-209ENST00000565511 ZBBXA8MT70 800 aa27.52■■■□□ 2
RAB40C-209ENST00000565511 IQCF3P0C7M6 154 aa27.52■■■□□ 2
RAB40C-209ENST00000565511 ADGRE1Q14246 886 aa27.52■■■□□ 2
RAB40C-209ENST00000565511 SART3Q15020 963 aaKnown RBP27.52■■■□□ 2
RAB40C-209ENST00000565511 PTGISQ16647 500 aa27.52■■■□□ 2
RAB40C-209ENST00000565511 CATIPQ7Z7H3 387 aa27.52■■■□□ 2
RAB40C-209ENST00000565511 MTIF3Q9H2K0 278 aaKnown RBP27.52■■■□□ 2
RAB40C-209ENST00000565511 GCOM1H8Y6P7 765 aaPredicted RBP27.51■■□□□ 1.99
RAB40C-209ENST00000565511 PITPNM1O00562 1244 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 SLC27A2O14975 620 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 PRC1O43663 620 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 PLEKHA8P1O95397 391 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 POLR2MP0CAP2 368 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 HOXD8P13378 290 aaPredicted RBP27.51■■□□□ 1.99
RAB40C-209ENST00000565511 UBA1P22314 1058 aaKnown RBP27.51■■□□□ 1.99
RAB40C-209ENST00000565511 PSEN2P49810 448 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 HIC1Q14526 733 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 GPNMBQ14956 572 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 RAB30Q15771 203 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 SESTD1Q86VW0 696 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 PPTC7Q8NI37 304 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 HDAC6Q9UBN7 1215 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 MSRAQ9UJ68 235 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 SLC4A7Q9Y6M7 1214 aa27.51■■□□□ 1.99
RAB40C-209ENST00000565511 FRMPD4Q14CM0 1322 aa27.5■■□□□ 1.99
RAB40C-209ENST00000565511 HAS3O00219 553 aa27.5■■□□□ 1.99
RAB40C-209ENST00000565511 SH2B2O14492 632 aaPredicted RBP27.5■■□□□ 1.99
RAB40C-209ENST00000565511 CASTP20810 708 aaKnown RBP27.5■■□□□ 1.99
RAB40C-209ENST00000565511 DGKDQ16760 1214 aa27.5■■□□□ 1.99
RAB40C-209ENST00000565511 HSDL1Q3SXM5 330 aa27.5■■□□□ 1.99
RAB40C-209ENST00000565511 MYSM1Q5VVJ2 828 aa27.5■■□□□ 1.99
RAB40C-209ENST00000565511 RAB11FIP4Q86YS3 637 aa27.5■■□□□ 1.99
RAB40C-209ENST00000565511 DHX37Q8IY37 1157 aaKnown RBP27.5■■□□□ 1.99
RAB40C-209ENST00000565511 WNT8BQ93098 351 aa27.5■■□□□ 1.99
RAB40C-209ENST00000565511 ALG1Q9BT22 464 aa27.5■■□□□ 1.99
RAB40C-209ENST00000565511 PRDM6Q9NQX0 595 aa27.5■■□□□ 1.99
RAB40C-209ENST00000565511 MAP3K20Q9NYL2 800 aaKnown RBP27.5■■□□□ 1.99
RAB40C-209ENST00000565511 GGPS1O95749 300 aa27.49■■□□□ 1.99
RAB40C-209ENST00000565511 F2P00734 622 aa27.49■■□□□ 1.99
RAB40C-209ENST00000565511 RXRAP19793 462 aa27.49■■□□□ 1.99
RAB40C-209ENST00000565511 LAMC2Q13753 1193 aa27.49■■□□□ 1.99
RAB40C-209ENST00000565511 CELF3Q5SZQ8 465 aaKnown RBP27.49■■□□□ 1.99
RAB40C-209ENST00000565511 GTF2IRD1Q9UHL9 959 aa27.49■■□□□ 1.99
RAB40C-209ENST00000565511 NOD1Q9Y239 953 aa27.49■■□□□ 1.99
RAB40C-209ENST00000565511 DDAH1O94760 285 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 233.7 ms